RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 ARHGAP19Q14CB8 494 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 TMEM35AQ53FP2 167 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 ATPAF1Q5TC12 328 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-207ENST00000470763 ANKRD16Q6P6B7 361 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 PGAP1Q75T13 922 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 OR2L5Q8NG80 312 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 LGR4Q9BXB1 951 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 PCBD2Q9H0N5 130 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 RSPH9Q9H1X1 276 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-207ENST00000470763 C1orf198Q9H425 327 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 UQCC1Q9NVA1 299 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 FLRT3Q9NZU0 649 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 PTPRSQ13332 1948 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 TXNL1O43396 289 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 SPI1P17947 270 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 AQP2P41181 271 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 RPS27P42677 84 aaKnown RBP12.51□□□□□ -0.41
NPHP4-207ENST00000470763 PEA15Q15121 130 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 INPP5JQ15735 1006 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-207ENST00000470763 LY6G5CQ5SRR4 150 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 DCST2Q5T1A1 773 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 RHOUQ7L0Q8 258 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 NAA40Q86UY6 237 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 ZNF619Q8N2I2 560 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 EDARADDQ8WWZ3 215 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 TMEM106AQ96A25 262 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 SELENOIQ9C0D9 397 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 FRRS1LQ9P0K9 344 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 GHRLQ9UBU3 117 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 GPR34Q9UPC5 381 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 KLHDC2Q9Y2U9 406 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 TBC1D3KA0A087X1G2 549 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 A0A1B0GTI1 187 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 A0A1B0GWA3 101 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-207ENST00000470763 TBC1D3BA6NDS4 549 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 TBC1D3FA6NER0 549 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-207ENST00000470763 YKT6O15498 198 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 CD1AP06126 327 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 GGTLC2Q14390 218 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 ARHGAP40Q5TG30 622 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 TBC1D3GQ6DHY5 549 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 ZNF813Q6ZN06 617 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 SHISA5Q8N114 240 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 INO80EQ8NBZ0 244 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-207ENST00000470763 MRI1Q9BV20 369 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 MTIF3Q9H2K0 278 aaKnown RBP12.51□□□□□ -0.41
NPHP4-207ENST00000470763 TMEM27Q9HBJ8 222 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 A0A1B0GTQ1 180 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 A0A1W2PPE3 182 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 EEF1E1-BLOC1S5C9J1V9 151 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 WNT11O96014 354 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 THBS1P07996 1170 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 PGAM2P15259 253 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 FOSL1P15407 271 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 AVPR2P30518 371 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 VASPP50552 380 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-207ENST00000470763 PRKXP51817 358 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 NKPD1Q17RQ9 610 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 GFOD2Q3B7J2 385 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 C10orf91Q5T1B1 145 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 ZAR1Q86SH2 424 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 LRRC25Q8N386 305 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-207ENST00000470763 OR5AP2Q8NGF4 316 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 LMF1Q96S06 567 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 ATG5Q9H1Y0 275 aa12.51□□□□□ -0.41
NPHP4-207ENST00000470763 RPH3AQ9Y2J0 694 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-207ENST00000470763 TRPM6Q9BX84 2022 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 A0A0B4J2A0 478 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 COLCA2A8K830 154 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 RAD1O60671 282 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 DBIP07108 87 aaKnown RBP12.5□□□□□ -0.41
NPHP4-207ENST00000470763 PTAFRP25105 342 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 ECH1Q13011 328 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 ZIC1Q15915 447 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 EIF2S3LQ2VIR3 472 aaKnown RBP12.5□□□□□ -0.41
NPHP4-207ENST00000470763 ELP5Q8TE02 316 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 ZBTB8AQ96BR9 441 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 ZNF350Q9GZX5 532 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 ALX4Q9H161 411 aaPredicted RBP12.5□□□□□ -0.41
NPHP4-207ENST00000470763 HRH4Q9H3N8 390 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 UPB1Q9UBR1 384 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 SHPKQ9UHJ6 478 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 SERTAD3Q9UJW9 196 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 FGF16O43320 207 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 DCNP07585 359 aaKnown RBP12.5□□□□□ -0.41
NPHP4-207ENST00000470763 SLC35G4P0C7Q5 338 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 SLC25A4P12235 298 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 ZNF28P17035 718 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 GPR143P51810 404 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 GAS6Q14393 721 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 TGIF1Q15583 401 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 USP53Q70EK8 1073 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 ZNF627Q7L945 461 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 NRROSQ86YC3 692 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 TMEM151BQ8IW70 566 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 COX18Q8N8Q8 333 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 NUBPLQ8TB37 319 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 ASB13Q8WXK3 278 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 C14orf79Q96F83 325 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms