RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SERPINI2O75830 405 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 ZNF432O94892 652 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 VAMP5O95183 116 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 AHSA1O95433 338 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 STAMBPO95630 424 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 TGFAP01135 160 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 CRYAAP02489 173 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 IGFBP1P08833 259 aaPredicted RBP4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 ADRA2AP08913 450 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 PATE4P0C8F1 98 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 APEHP13798 732 aaKnown RBP4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 CBR1P16152 277 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 TCN1P20061 433 aaPredicted RBP4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 AQP1P29972 269 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 GRPRP30550 384 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 IL2RGP31785 369 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 NR4A2P43354 598 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 CAPZA2P47755 286 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 IDH3GP51553 393 aaPredicted RBP4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 SNRPD2P62316 118 aaKnown RBP4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 TXNL4AP83876 142 aaKnown RBP4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 LRRC74AQ0VAA2 488 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 C1DQ13901 141 aaKnown RBP4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 KRTAP24-1Q3LI83 254 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 ZMAT1Q5H9K5 638 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 FAM120AOSQ5T036 256 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 RNF220Q5VTB9 566 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 KRT80Q6KB66 452 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 EPGNQ6UW88 154 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 H1FNTQ75WM6 255 aaPredicted RBP4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 OVCH2Q7RTZ1 564 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 SPATA21Q7Z572 469 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 ABHD12BQ7Z5M8 362 aaPredicted RBP4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 MDP1Q86V88 176 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 CARM1Q86X55 608 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 MSRB3Q8IXL7 192 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 KIRREL3Q8IZU9 778 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 GPR137CQ8N3F9 429 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 SVOPLQ8N434 492 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 PRR18Q8N4B5 295 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 POU5F2Q8N7G0 328 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 TMEM158Q8WZ71 300 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 SLC7A6OSQ96CW6 309 aaPredicted RBP4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 THOC1Q96FV9 657 aaKnown RBP4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 DOK1Q99704 481 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 PIMREGQ9BSJ6 248 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 LINC00470Q9BZP3 86 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 BPESC1Q9GZL8 116 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 PLK3Q9H4B4 646 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 IKZF5Q9H5V7 419 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 ARMC7Q9H6L4 198 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 NOX3Q9HBY0 568 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 TMBIM4Q9HC24 238 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 CRLF2Q9HC73 371 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 BCL2L10Q9HD36 194 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 SLCO1B3Q9NPD5 702 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 SLC52A3Q9NQ40 469 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 MED29Q9NX70 200 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 NKIRAS1Q9NYS0 192 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 CCDC167Q9P0B6 97 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 VAPAQ9P0L0 249 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 CRNNQ9UBG3 495 aaPredicted RBP4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 RPS6KB2Q9UBS0 482 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 FZR1Q9UM11 496 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 RASD1Q9Y272 281 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 IFT52Q9Y366 437 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 USH1CQ9Y6N9 552 aa4.05□□□□□ -1.76
GTF3C3-208ENST00000455546 FBN1P35555 2871 aaKnown RBP4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 A0A087WUJ7 227 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 A0A096LPI6 279 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 ARPC4-TTLL3A0A0A6YYG9 625 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 IGHV2OR16-5A0A0B4J2B6 119 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 LOC390937A0A1W2PQ73 354 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 C11orf98E9PRG8 122 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 RPL36A-HNRNPH2H7BZ11 118 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 hCG_2039718K7EN88 272 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 M0QX08 132 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 AIM2O14862 343 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 WNT9BO14905 357 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 SLC43A1O75387 559 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 IGKV3-15P01624 115 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 IGLV1-44P01699 117 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 HLA-HP01893 362 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 BGLAPP02818 100 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 OPN1SWP03999 348 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 CD79AP11912 226 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 DAOP14920 347 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 ETS2P15036 469 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 NQO1P15559 274 aaKnown RBP4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 HOXB9P17482 250 aaPredicted RBP4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 SRD5A1P18405 259 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 NPR2P20594 1047 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 AHCYP23526 432 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 COL8A2P25067 703 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 GTF2E2P29084 291 aaKnown RBP4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 GZMKP49863 264 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 SEC24CP53992 1094 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 SLC18A1P54219 525 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 CDH12P55289 794 aa4.04□□□□□ -1.76
GTF3C3-208ENST00000455546 CDK6Q00534 326 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms