RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CEP70Q8NHQ1 597 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 PEX13Q92968 403 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 FBXL8Q96CD0 374 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 DAZAP1Q96EP5 407 aaKnown RBP3.95□□□□□ -1.78
SDCBP-205ENST00000447267 NRBF2Q96F24 287 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 PPP1R2P1Q96PQ5 205 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 PRPF18Q99633 342 aaKnown RBP3.95□□□□□ -1.78
SDCBP-205ENST00000447267 FAM110AQ9BQ89 295 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 MUC13Q9H3R2 512 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF702PQ9H963 129 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 ANKRA2Q9H9E1 313 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 PARVBQ9HBI1 364 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 CRLF2Q9HC73 371 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 XAB2Q9HCS7 855 aaKnown RBP3.95□□□□□ -1.78
SDCBP-205ENST00000447267 RETNQ9HD89 108 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 HINT3Q9NQE9 182 aaKnown RBP3.95□□□□□ -1.78
SDCBP-205ENST00000447267 SDHAF3Q9NRP4 125 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 TREX1Q9NSU2 369 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 NDE1Q9NXR1 346 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 CRNNQ9UBG3 495 aaPredicted RBP3.95□□□□□ -1.78
SDCBP-205ENST00000447267 UPB1Q9UBR1 384 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 MALT1Q9UDY8 824 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 LAMP5Q9UJQ1 280 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 ANAPC5Q9UJX4 755 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 CRYL1Q9Y2S2 319 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 PLLPQ9Y342 182 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 hCG_1818297A0A087WSY0 165 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 A0A1W2PRB8 838 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 A0A1W2PRD5 423 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 A0A1W2PRF3 423 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 A0A1W2PRM7 423 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 GOLGA8KD6RF30 607 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 E5RI56 91 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 F5H0A9 414 aaPredicted RBP3.94□□□□□ -1.78
SDCBP-205ENST00000447267 GOLGA8TH3BQL2 631 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 PGRMC2O15173 223 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 RTL8CO15255 209 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 MRPL33O75394 65 aaKnown RBP3.94□□□□□ -1.78
SDCBP-205ENST00000447267 IGF2P01344 180 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 IFNA6P05013 189 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 HCKP08631 526 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 WNT2P09544 360 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 GSTT2P0CG29 244 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 GSTT2BP0CG30 244 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 ADRA1DP25100 572 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 GSTM2P28161 218 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 RYKP34925 604 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 CFHR2P36980 270 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 GRIA1P42261 906 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 PPICP45877 212 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 PTDSS1P48651 473 aaKnown RBP3.94□□□□□ -1.78
SDCBP-205ENST00000447267 BLVRAP53004 296 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 RELQ04864 619 aaPredicted RBP3.94□□□□□ -1.78
SDCBP-205ENST00000447267 IFFO1Q0D2I5 559 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF763Q0D2J5 394 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF155Q12901 538 aaPredicted RBP3.94□□□□□ -1.78
SDCBP-205ENST00000447267 NPRL3Q12980 569 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 TRAF3Q13114 568 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 SEC23BQ15437 767 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 KRT71Q3SY84 523 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 IGSF11Q5DX21 431 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 TSPO2Q5TGU0 170 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 LGALS9CQ6DKI2 356 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 PLBD1Q6P4A8 553 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 PAQR6Q6TCH4 344 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 APOOLQ6UXV4 268 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 NPSR1Q6W5P4 371 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 RNF165Q6ZSG1 346 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 CENPUQ71F23 418 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 KRT73Q86Y46 540 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF645Q8N7E2 425 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 SCAIQ8N9R8 606 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 ITLN1Q8WWA0 313 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 IFT81Q8WYA0 676 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 WDR34Q96EX3 536 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 LINGO1Q96FE5 620 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 C3orf30Q96M34 536 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 CCDC42Q96M95 316 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 ERGIC2Q96RQ1 377 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF649Q9BS31 505 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 LRRC1Q9BTT6 524 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 PPP1R3EQ9H7J1 279 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 RMND5AQ9H871 391 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 MED17Q9NVC6 651 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 ZNRD1Q9P1U0 126 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 KIAA1456Q9P272 454 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF639Q9UID6 485 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 DHRS7Q9Y394 339 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 NPTNQ9Y639 398 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 FAT4Q6V0I7 4981 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 DNAH6Q9C0G6 4158 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 PKD1P98161 4303 aa3.94□□□□□ -1.78
SDCBP-205ENST00000447267 TRAV6A0A075B6T7 132 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 CTAGE9A4FU28 777 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 CXorf65A6NEN9 183 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 LGALS16A8MUM7 142 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF195O14628 629 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 XRCC3O43542 346 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 OR5F1O95221 314 aa3.93□□□□□ -1.78
SDCBP-205ENST00000447267 BRI3O95415 125 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms