RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SLC7A8Q9UHI5 535 aa18.1■□□□□ 0.49
VSX1-206ENST00000444511 FZR1Q9UM11 496 aa18.1■□□□□ 0.49
VSX1-206ENST00000444511 SH3GLB1Q9Y371 365 aa18.1■□□□□ 0.49
VSX1-206ENST00000444511 BLOC1S5-TXNDC5H3BN57 136 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 FBP2O00757 339 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 IGHG1P01857 330 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 QDPRP09417 244 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 PGA4P0DJD7 388 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 PGA3P0DJD8 388 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 TCN1P20061 433 aaPredicted RBP18.09■□□□□ 0.49
VSX1-206ENST00000444511 GZMMP51124 257 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 CLRN1P58418 232 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 TRIP10Q15642 601 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 KRTAP24-1Q3LI83 254 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 RABL3Q5HYI8 236 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 CARM1Q86X55 608 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 ZNF584Q8IVC4 421 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 LINC01356Q8N9X3 169 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 ECSITQ9BQ95 431 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 PRSS27Q9BQR3 290 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 RNF121Q9H920 327 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 ARGLU1Q9NWB6 273 aaPredicted RBP18.09■□□□□ 0.49
VSX1-206ENST00000444511 DUSP13Q9UII6 198 aa18.09■□□□□ 0.49
VSX1-206ENST00000444511 MALRD1Q5VYJ5 2156 aa18.08■□□□□ 0.49
VSX1-206ENST00000444511 A0A1W2PPW3 197 aa18.08■□□□□ 0.48
VSX1-206ENST00000444511 MCIDASD6RGH6 385 aa18.08■□□□□ 0.48
VSX1-206ENST00000444511 CRYBA2P53672 197 aa18.08■□□□□ 0.48
VSX1-206ENST00000444511 TAS2R41P59536 307 aa18.08■□□□□ 0.48
VSX1-206ENST00000444511 MAD2L1BPQ15013 274 aaPredicted RBP18.08■□□□□ 0.48
VSX1-206ENST00000444511 REP15Q6BDI9 236 aa18.08■□□□□ 0.48
VSX1-206ENST00000444511 TMEM53Q6P2H8 277 aa18.08■□□□□ 0.48
VSX1-206ENST00000444511 UGT2A3Q6UWM9 527 aa18.08■□□□□ 0.48
VSX1-206ENST00000444511 LRP11Q86VZ4 500 aa18.08■□□□□ 0.48
VSX1-206ENST00000444511 SLC30A7Q8NEW0 376 aa18.08■□□□□ 0.48
VSX1-206ENST00000444511 OR4K5Q8NGD3 323 aa18.08■□□□□ 0.48
VSX1-206ENST00000444511 TMEM120AQ9BXJ8 343 aa18.08■□□□□ 0.48
VSX1-206ENST00000444511 MEPEQ9NQ76 525 aaPredicted RBP18.08■□□□□ 0.48
VSX1-206ENST00000444511 BAG5Q9UL15 447 aa18.08■□□□□ 0.48
VSX1-206ENST00000444511 A0A1W2PRG6 482 aa18.07■□□□□ 0.48
VSX1-206ENST00000444511 MT-ND1P03886 318 aa18.07■□□□□ 0.48
VSX1-206ENST00000444511 TNFRSF1BP20333 461 aa18.07■□□□□ 0.48
VSX1-206ENST00000444511 ZNF84P51523 738 aa18.07■□□□□ 0.48
VSX1-206ENST00000444511 SEC24CP53992 1094 aa18.07■□□□□ 0.48
VSX1-206ENST00000444511 CCNIQ14094 377 aa18.07■□□□□ 0.48
VSX1-206ENST00000444511 SLC36A2Q495M3 483 aa18.07■□□□□ 0.48
VSX1-206ENST00000444511 MMEL1Q495T6 779 aa18.07■□□□□ 0.48
VSX1-206ENST00000444511 ELFN2Q5R3F8 820 aa18.07■□□□□ 0.48
VSX1-206ENST00000444511 DEF8Q6ZN54 512 aa18.07■□□□□ 0.48
VSX1-206ENST00000444511 SLC16A14Q7RTX9 510 aa18.07■□□□□ 0.48
VSX1-206ENST00000444511 DPPA2Q7Z7J5 298 aa18.07■□□□□ 0.48
VSX1-206ENST00000444511 LRRC58Q96CX6 371 aa18.07■□□□□ 0.48
VSX1-206ENST00000444511 C1orf198Q9H425 327 aa18.07■□□□□ 0.48
VSX1-206ENST00000444511 CDH20Q9HBT6 801 aa18.07■□□□□ 0.48
VSX1-206ENST00000444511 MYEF2Q9P2K5 600 aaKnown RBP18.07■□□□□ 0.48
VSX1-206ENST00000444511 ZNF346Q9UL40 294 aaKnown RBP18.07■□□□□ 0.48
VSX1-206ENST00000444511 SLC22A23A1A5C7 686 aa18.06■□□□□ 0.48
VSX1-206ENST00000444511 HPXP02790 462 aa18.06■□□□□ 0.48
VSX1-206ENST00000444511 F13BP05160 661 aa18.06■□□□□ 0.48
VSX1-206ENST00000444511 FUT1P19526 365 aa18.06■□□□□ 0.48
VSX1-206ENST00000444511 RBM34P42696 430 aaKnown RBP18.06■□□□□ 0.48
VSX1-206ENST00000444511 CDH15P55291 814 aa18.06■□□□□ 0.48
VSX1-206ENST00000444511 SELENOVP59797 346 aa18.06■□□□□ 0.48
VSX1-206ENST00000444511 RPL18Q07020 188 aaKnown RBP18.06■□□□□ 0.48
VSX1-206ENST00000444511 RGS7BPQ6MZT1 257 aaPredicted RBP18.06■□□□□ 0.48
VSX1-206ENST00000444511 HDDC2Q7Z4H3 204 aa18.06■□□□□ 0.48
VSX1-206ENST00000444511 CALHM3Q86XJ0 350 aa18.06■□□□□ 0.48
VSX1-206ENST00000444511 NKAIN4Q8IVV8 208 aa18.06■□□□□ 0.48
VSX1-206ENST00000444511 NOXO1Q8NFA2 376 aa18.06■□□□□ 0.48
VSX1-206ENST00000444511 OR8J3Q8NGG0 315 aa18.06■□□□□ 0.48
VSX1-206ENST00000444511 PFN4Q8NHR9 129 aa18.06■□□□□ 0.48
VSX1-206ENST00000444511 RDH5Q92781 318 aa18.06■□□□□ 0.48
VSX1-206ENST00000444511 MCHR2Q969V1 340 aa18.06■□□□□ 0.48
VSX1-206ENST00000444511 ZNF347Q96SE7 839 aa18.06■□□□□ 0.48
VSX1-206ENST00000444511 POLR2J2Q9GZM3 115 aaKnown RBP18.06■□□□□ 0.48
VSX1-206ENST00000444511 POLR2J3Q9H1A7 115 aaKnown RBP18.06■□□□□ 0.48
VSX1-206ENST00000444511 MRGBPQ9NV56 204 aa18.06■□□□□ 0.48
VSX1-206ENST00000444511 TMEFF2Q9UIK5 374 aaPredicted RBP18.06■□□□□ 0.48
VSX1-206ENST00000444511 SVEP1Q4LDE5 3571 aa18.06■□□□□ 0.48
VSX1-206ENST00000444511 SHOX2O60902 331 aaPredicted RBP18.05■□□□□ 0.48
VSX1-206ENST00000444511 OR7A10O76100 309 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 OR5F1O95221 314 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 PTHP01270 115 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 IFNA14P01570 189 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 FAM157BP0CG42 384 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 TROVE2P10155 538 aaKnown RBP eCLIP18.05■□□□□ 0.48
VSX1-206ENST00000444511 NAT2P11245 290 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 CCL2P13500 99 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 GPR6P46095 362 aaPredicted RBP18.05■□□□□ 0.48
VSX1-206ENST00000444511 DAP3P51398 398 aaKnown RBP18.05■□□□□ 0.48
VSX1-206ENST00000444511 UGT2B15P54855 530 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 MYBPC1Q00872 1141 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 SRSF2Q01130 221 aaKnown RBP18.05■□□□□ 0.48
VSX1-206ENST00000444511 PLP2Q04941 152 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 RUNX1T1Q06455 604 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 HIST3H3Q16695 136 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 NKPD1Q17RQ9 610 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 TBC1D28Q2M2D7 210 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 NRN1LQ496H8 165 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 ERICH5Q6P6B1 374 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 SYT14Q8NB59 555 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms