RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 ACTR6Q9GZN1 396 aa4.13□□□□□ -1.75
TM9SF3-202ENST00000443638 NAA50Q9GZZ1 169 aaKnown RBP4.13□□□□□ -1.75
TM9SF3-202ENST00000443638 JPT2Q9H910 190 aa4.13□□□□□ -1.75
TM9SF3-202ENST00000443638 MMP17Q9ULZ9 603 aa4.13□□□□□ -1.75
TM9SF3-202ENST00000443638 ING4Q9UNL4 249 aa4.13□□□□□ -1.75
TM9SF3-202ENST00000443638 SLC22A14Q9Y267 594 aa4.13□□□□□ -1.75
TM9SF3-202ENST00000443638 ERVV-1B6SEH8 477 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 RNASEK-C17orf49H0YIS7 233 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 IDH3BO43837 385 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 NTN1O95631 604 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 KLK3P07288 261 aaPredicted RBP4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 ACSM4P0C7M7 580 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 ANOS1P23352 680 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 GCKP35557 465 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 HMGCLP35914 325 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 P2RY2P41231 377 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 CSNK1A1P48729 337 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 CCR8P51685 355 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 HILS1P60008 231 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 RPL32P62910 135 aaKnown RBP4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 SLC10A1Q14973 349 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 TNXAQ16473 311 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 ZNF585BQ52M93 769 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 CXCL17Q6UXB2 119 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 ZNF546Q86UE3 836 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 PRR22Q8IZ63 422 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 Q8NBF4 154 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 CYB561A3Q8NBI2 242 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 HSD17B11Q8NBQ5 300 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 NOXO1Q8NFA2 376 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 OR51F2Q8NH61 342 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 LGALS14Q8TCE9 139 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 CXorf40AQ8TE69 158 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 AGAP11Q8TF27 550 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 RNF170Q96K19 258 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 NAPGQ99747 312 aaPredicted RBP4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 ELOVL4Q9GZR5 314 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 OR51J1Q9H342 316 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 TMEM38AQ9H6F2 299 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 ANKHQ9HCJ1 492 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 SENP1Q9P0U3 644 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 CTSZQ9UBR2 303 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 MTRF1LQ9UGC7 380 aaKnown RBP4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 DCDC2Q9UHG0 476 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 CLEC2DQ9UHP7 191 aa4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 MRM2Q9UI43 246 aaKnown RBP4.12□□□□□ -1.75
TM9SF3-202ENST00000443638 A0A1B0GU03 582 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 A0A1B0GW55 424 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 EPM2AB3EWF7 344 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 SAP18O00422 153 aaKnown RBP4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 SOCS3O14543 225 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 RENP00797 406 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 IGLV2-11P01706 119 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 RPN2P04844 631 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 DUX4L2P0CJ85 424 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 DUX4L3P0CJ86 424 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 DUX4L4P0CJ87 422 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 DUX4L5P0CJ88 424 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 DUX4L6P0CJ89 424 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 DUX4L7P0CJ90 424 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 PNMA6AP0CW24 399 aaPredicted RBP4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 TCN1P20061 433 aaPredicted RBP4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 PSMB6P28072 239 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 HTR2CP28335 458 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 IL2RGP31785 369 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 RFC3P40938 356 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 CLDN6P56747 220 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 OR2B6P58173 313 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 ERVK11-1P61568 191 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 OR5M10Q6IEU7 315 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 DUX4L9Q6RFH8 374 aaPredicted RBP4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 CD300LGQ6UXG3 332 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 NRMQ8IXM6 262 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 C6orf223Q8N319 242 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 ZNF614Q8N883 585 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 MDS2Q8NDY4 140 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 OR4Q3Q8NH05 313 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 ITFG1Q8TB96 612 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 NPRL2Q8WTW4 380 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 RASL10AQ92737 203 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 SLC45A3Q96JT2 553 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 EPYCQ99645 322 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 LITAFQ99732 161 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 RARRES2Q99969 163 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 CHCHD5Q9BSY4 110 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 SELENOIQ9C0D9 397 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 CHRNA10Q9GZZ6 450 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 C20orf85Q9H1P6 137 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 SYT4Q9H2B2 425 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 TUBB1Q9H4B7 451 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 RNF167Q9H6Y7 350 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 OR2S2Q9NQN1 319 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 DUX4Q9UBX2 424 aa4.11□□□□□ -1.75
TM9SF3-202ENST00000443638 AQRO60306 1485 aaKnown RBP eCLIP4.11□□□□□ -1.754e-8■■■■■ 27.5
TM9SF3-202ENST00000443638 SMIM28A0A1B0GU29 152 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 H3BN98 237 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 K7EMT4 169 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 B4GALT5O43286 388 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 ERI3O43414 337 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 MGRN1O60291 552 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms