RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 LYPD3O95274 346 aa17.8■□□□□ 0.44
CPNE1-219ENST00000440240 BCL10O95999 233 aa17.8■□□□□ 0.44
CPNE1-219ENST00000440240 PTHP01270 115 aa17.8■□□□□ 0.44
CPNE1-219ENST00000440240 THY1P04216 161 aa17.8■□□□□ 0.44
CPNE1-219ENST00000440240 MTPNP58546 118 aa17.8■□□□□ 0.44
CPNE1-219ENST00000440240 NRN1LQ496H8 165 aa17.8■□□□□ 0.44
CPNE1-219ENST00000440240 GLCCI1Q86VQ1 547 aa17.8■□□□□ 0.44
CPNE1-219ENST00000440240 RBM45Q8IUH3 476 aaKnown RBP17.8■□□□□ 0.44
CPNE1-219ENST00000440240 LRRC17Q8N6Y2 441 aa17.8■□□□□ 0.44
CPNE1-219ENST00000440240 SLC30A7Q8NEW0 376 aa17.8■□□□□ 0.44
CPNE1-219ENST00000440240 VANGL1Q8TAA9 524 aaPredicted RBP17.8■□□□□ 0.44
CPNE1-219ENST00000440240 FGFBP3Q8TAT2 258 aa17.8■□□□□ 0.44
CPNE1-219ENST00000440240 RASSF5Q8WWW0 418 aa17.8■□□□□ 0.44
CPNE1-219ENST00000440240 PCDHAC1Q9H158 963 aa17.8■□□□□ 0.44
CPNE1-219ENST00000440240 RNF121Q9H920 327 aa17.8■□□□□ 0.44
CPNE1-219ENST00000440240 TMEM38BQ9NVV0 291 aa17.8■□□□□ 0.44
CPNE1-219ENST00000440240 FZR1Q9UM11 496 aa17.8■□□□□ 0.44
CPNE1-219ENST00000440240 MGRN1O60291 552 aa17.79■□□□□ 0.44
CPNE1-219ENST00000440240 QDPRP09417 244 aa17.79■□□□□ 0.44
CPNE1-219ENST00000440240 ASAH2BP0C7U1 165 aa17.79■□□□□ 0.44
CPNE1-219ENST00000440240 PGA4P0DJD7 388 aa17.79■□□□□ 0.44
CPNE1-219ENST00000440240 PGA3P0DJD8 388 aa17.79■□□□□ 0.44
CPNE1-219ENST00000440240 UMPSP11172 480 aa17.79■□□□□ 0.44
CPNE1-219ENST00000440240 CD247P20963 164 aa17.79■□□□□ 0.44
CPNE1-219ENST00000440240 NFYCQ13952 458 aa17.79■□□□□ 0.44
CPNE1-219ENST00000440240 MAD2L1BPQ15013 274 aaPredicted RBP17.79■□□□□ 0.44
CPNE1-219ENST00000440240 SLC36A2Q495M3 483 aa17.79■□□□□ 0.44
CPNE1-219ENST00000440240 RGS7BPQ6MZT1 257 aaPredicted RBP17.79■□□□□ 0.44
CPNE1-219ENST00000440240 TMEM53Q6P2H8 277 aa17.79■□□□□ 0.44
CPNE1-219ENST00000440240 RETREG3Q86VR2 466 aa17.79■□□□□ 0.44
CPNE1-219ENST00000440240 OR4D11Q8NGI4 311 aa17.79■□□□□ 0.44
CPNE1-219ENST00000440240 SH3GL3Q99963 347 aa17.79■□□□□ 0.44
CPNE1-219ENST00000440240 ZNF426Q9BUY5 554 aa17.79■□□□□ 0.44
CPNE1-219ENST00000440240 ZNF416Q9BWM5 594 aa17.79■□□□□ 0.44
CPNE1-219ENST00000440240 RACGAP1Q9H0H5 632 aa17.79■□□□□ 0.44
CPNE1-219ENST00000440240 INTS9Q9NV88 658 aaKnown RBP17.79■□□□□ 0.44
CPNE1-219ENST00000440240 MYEF2Q9P2K5 600 aaKnown RBP17.79■□□□□ 0.44
CPNE1-219ENST00000440240 METRNQ9UJH8 293 aa17.79■□□□□ 0.44
CPNE1-219ENST00000440240 KPNA4O00629 521 aaPredicted RBP17.78■□□□□ 0.44
CPNE1-219ENST00000440240 IGHG1P01857 330 aa17.78■□□□□ 0.44
CPNE1-219ENST00000440240 TFP02787 698 aa17.78■□□□□ 0.44
CPNE1-219ENST00000440240 NAT2P11245 290 aa17.78■□□□□ 0.44
CPNE1-219ENST00000440240 PCGF2P35227 344 aa17.78■□□□□ 0.44
CPNE1-219ENST00000440240 RAD52P43351 418 aa17.78■□□□□ 0.44
CPNE1-219ENST00000440240 SELPLGQ14242 412 aa17.78■□□□□ 0.44
CPNE1-219ENST00000440240 MELKQ14680 651 aa17.78■□□□□ 0.44
CPNE1-219ENST00000440240 NKPD1Q17RQ9 610 aa17.78■□□□□ 0.44
CPNE1-219ENST00000440240 MMEL1Q495T6 779 aa17.78■□□□□ 0.44
CPNE1-219ENST00000440240 OR1J2Q8NGS2 313 aa17.78■□□□□ 0.44
CPNE1-219ENST00000440240 CLDND2Q8NHS1 167 aa17.78■□□□□ 0.44
CPNE1-219ENST00000440240 C11orf40Q8WZ69 217 aa17.78■□□□□ 0.44
CPNE1-219ENST00000440240 LRMDAQ9H2I8 198 aa17.78■□□□□ 0.44
CPNE1-219ENST00000440240 CDH20Q9HBT6 801 aa17.78■□□□□ 0.44
CPNE1-219ENST00000440240 ZNF275Q9NSD4 429 aaPredicted RBP17.78■□□□□ 0.44
CPNE1-219ENST00000440240 SLCO1C1Q9NYB5 712 aa17.78■□□□□ 0.44
CPNE1-219ENST00000440240 BLOC1S5-TXNDC5H3BN57 136 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 PPIHO43447 177 aaKnown RBP17.77■□□□□ 0.44
CPNE1-219ENST00000440240 SAGP10523 405 aaPredicted RBP17.77■□□□□ 0.44
CPNE1-219ENST00000440240 ZNF84P51523 738 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 CLRN1P58418 232 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 PLP2Q04941 152 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 HIST3H3Q16695 136 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 RINLQ6ZS11 566 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 CCDC80Q76M96 950 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 SLC16A14Q7RTX9 510 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 NANOGNBQ7Z5D8 188 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 CARM1Q86X55 608 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 OR4K5Q8NGD3 323 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 OR10A6Q8NH74 314 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 ZNF519Q8TB69 540 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 SYNPRQ8TBG9 265 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 MCHR2Q969V1 340 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 TMEM186Q96B77 213 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 TAMM41Q96BW9 452 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 TAAR3PQ9P1P4 343 aa17.77■□□□□ 0.44
CPNE1-219ENST00000440240 ANK2Q01484 3957 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 A0A0A6YYJ9 748 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 IQCMA0A1B0GVH7 501 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 A0A1W2PRG6 482 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 CENPBD1B2RD01 187 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 SNAP29O95721 258 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 MSMBP08118 114 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 FAM157BP0CG42 384 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 ZNF250P15622 560 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 UCP2P55851 309 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 KLF3P57682 345 aaPredicted RBP17.76■□□□□ 0.43
CPNE1-219ENST00000440240 SCGB2A2Q13296 93 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 MOGQ16653 247 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 TBC1D28Q2M2D7 210 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 VMACQ2NL98 169 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 PCGF3Q3KNV8 242 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 TTMPQ5BVD1 217 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 METTL21CQ5VZV1 264 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 TMEM154Q6P9G4 183 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 HDDC2Q7Z4H3 204 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 TSPYL5Q86VY4 417 aaPredicted RBP17.76■□□□□ 0.43
CPNE1-219ENST00000440240 SNX33Q8WV41 574 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 YIPF5Q969M3 257 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 MAGEB18Q96M61 343 aa17.76■□□□□ 0.43
CPNE1-219ENST00000440240 SH3GL1Q99961 368 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms