RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 ADAM5Q6NVV9 412 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 ZNF813Q6ZN06 617 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 ZNF620Q6ZNG0 422 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 FAM122BQ7Z309 247 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 ABHD12BQ7Z5M8 362 aaPredicted RBP6.74□□□□□ -1.33
CPSF4-202ENST00000412686 MYPOPQ86VE0 399 aaPredicted RBP6.74□□□□□ -1.33
CPSF4-202ENST00000412686 PAPD5Q8NDF8 572 aaKnown RBP6.74□□□□□ -1.33
CPSF4-202ENST00000412686 OR10G2Q8NGC3 310 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 OR8D4Q8NGM9 314 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 FGFBP3Q8TAT2 258 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 FANK1Q8TC84 345 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 GNPDA2Q8TDQ7 276 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 HSD17B8Q92506 261 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 NSMAFQ92636 917 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 GTPBP3Q969Y2 492 aaKnown RBP6.74□□□□□ -1.33
CPSF4-202ENST00000412686 NMD3Q96D46 503 aaKnown RBP6.74□□□□□ -1.33
CPSF4-202ENST00000412686 MUCL1Q96DR8 90 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 LRR1Q96L50 414 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 SAMD8Q96LT4 415 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 ADAD1Q96M93 576 aaKnown RBP6.74□□□□□ -1.33
CPSF4-202ENST00000412686 FOXB1Q99853 325 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 NIPSNAP1Q9BPW8 284 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 PLA2G12AQ9BZM1 189 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 PLEKHF2Q9H8W4 249 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 CCM2LQ9NUG4 571 aaPredicted RBP6.74□□□□□ -1.33
CPSF4-202ENST00000412686 ZNF224Q9NZL3 707 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 POFUT2Q9Y2G5 429 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 IER3IP1Q9Y5U9 82 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 MAGED1Q9Y5V3 778 aaPredicted RBP6.74□□□□□ -1.33
CPSF4-202ENST00000412686 FBN2P35556 2912 aa6.74□□□□□ -1.33
CPSF4-202ENST00000412686 IGHV1-18A0A0C4DH31 117 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 NPIPB13A6NJU9 1138 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 NPIPB4C9JG80 1138 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 ABCD4O14678 606 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 DHHO43323 396 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 CIB2O75838 187 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 SOX14O95416 240 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 HLA-HP01893 362 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 TP53P04637 393 aaPredicted RBP6.73□□□□□ -1.33
CPSF4-202ENST00000412686 PRKACGP22612 351 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 HOXC12P31275 282 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 CDAP32320 146 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 CAPZA2P47755 286 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 PRPS1P60891 318 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 UBE2NP61088 152 aaKnown RBP6.73□□□□□ -1.33
CPSF4-202ENST00000412686 PIGFQ07326 219 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 TSPAN31Q12999 210 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 KRR1Q13601 381 aaKnown RBP6.73□□□□□ -1.33
CPSF4-202ENST00000412686 MICAQ29983 383 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 RFX4Q33E94 735 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 CLEC12AQ5QGZ9 265 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 ANKRD16Q6P6B7 361 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 SLC25A47Q6Q0C1 308 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 SMARCD3Q6STE5 483 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 KLHL17Q6TDP4 642 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 B3GLCTQ6Y288 498 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 ZNF704Q6ZNC4 412 aaPredicted RBP6.73□□□□□ -1.33
CPSF4-202ENST00000412686 PTCHD4Q6ZW05 846 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 MDP1Q86V88 176 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 P2RY8Q86VZ1 359 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 SKA3Q8IX90 412 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 C17orf78Q8N4C9 275 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 ARIH2OSQ8N7S6 290 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 LILRB1Q8NHL6 650 aaPredicted RBP6.73□□□□□ -1.33
CPSF4-202ENST00000412686 MAGEE2Q8TD90 523 aaPredicted RBP6.73□□□□□ -1.33
CPSF4-202ENST00000412686 ZNF570Q96NI8 536 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 FOXN4Q96NZ1 517 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 ERMAPQ96PL5 475 aaPredicted RBP6.73□□□□□ -1.33
CPSF4-202ENST00000412686 GPX7Q96SL4 187 aaPredicted RBP6.73□□□□□ -1.33
CPSF4-202ENST00000412686 SH3GL3Q99963 347 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 TMEM204Q9BSN7 226 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 MMADHCQ9H3L0 296 aaPredicted RBP6.73□□□□□ -1.33
CPSF4-202ENST00000412686 FN3KQ9H479 309 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 UBTD1Q9HAC8 227 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 NTN4Q9HB63 628 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 KRCC1Q9NPI7 259 aaPredicted RBP6.73□□□□□ -1.33
CPSF4-202ENST00000412686 B3GAT2Q9NPZ5 323 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 NRIP3Q9NQ35 241 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 TMEM38BQ9NVV0 291 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 GRHPRQ9UBQ7 328 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 PLEKHA6Q9Y2H5 1048 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 AMDHD2Q9Y303 409 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 RNF115Q9Y4L5 304 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 UGT2A1Q9Y4X1 527 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 ADGRG4Q8IZF6 3080 aa6.73□□□□□ -1.33
CPSF4-202ENST00000412686 ARPC4-TTLL3A0A0A6YYG9 625 aa6.72□□□□□ -1.33
CPSF4-202ENST00000412686 SHISA9B4DS77 424 aa6.72□□□□□ -1.33
CPSF4-202ENST00000412686 ATP6V1G2-DDX39BF2Z307 99 aa6.72□□□□□ -1.33
CPSF4-202ENST00000412686 GNGT2O14610 69 aa6.72□□□□□ -1.33
CPSF4-202ENST00000412686 E2F6O75461 281 aa6.72□□□□□ -1.33
CPSF4-202ENST00000412686 GPANK1O95872 356 aa6.72□□□□□ -1.33
CPSF4-202ENST00000412686 SCG5P05408 212 aa6.72□□□□□ -1.33
CPSF4-202ENST00000412686 CD3EP07766 207 aa6.72□□□□□ -1.33
CPSF4-202ENST00000412686 CECR9P0C854 216 aa6.72□□□□□ -1.33
CPSF4-202ENST00000412686 CD79AP11912 226 aa6.72□□□□□ -1.33
CPSF4-202ENST00000412686 CTLA4P16410 223 aa6.72□□□□□ -1.33
CPSF4-202ENST00000412686 CD40P25942 277 aa6.72□□□□□ -1.33
CPSF4-202ENST00000412686 SDHAP31040 664 aa6.72□□□□□ -1.33
CPSF4-202ENST00000412686 SLC6A6P31641 620 aa6.72□□□□□ -1.33
CPSF4-202ENST00000412686 IFNGR2P38484 337 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 511 ms