RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 FAM117AQ9C073 453 aa17■□□□□ 0.31
USP39-202ENST00000409025 RNF32Q9H0A6 362 aa17■□□□□ 0.31
USP39-202ENST00000409025 PPIL3Q9H2H8 161 aaKnown RBP17■□□□□ 0.31
USP39-202ENST00000409025 PARD6AQ9NPB6 346 aa17■□□□□ 0.31
USP39-202ENST00000409025 IKZF2Q9UKS7 526 aa17■□□□□ 0.31
USP39-202ENST00000409025 TTC28Q96AY4 2481 aa17■□□□□ 0.31
USP39-202ENST00000409025 ZNF593O00488 134 aaPredicted RBP17■□□□□ 0.31
USP39-202ENST00000409025 TERTO14746 1132 aaKnown RBP17■□□□□ 0.31
USP39-202ENST00000409025 CBR3O75828 277 aa17■□□□□ 0.31
USP39-202ENST00000409025 GATBO75879 557 aaKnown RBP17■□□□□ 0.31
USP39-202ENST00000409025 GLO1Q04760 184 aa17■□□□□ 0.31
USP39-202ENST00000409025 ZMAT1Q5H9K5 638 aa17■□□□□ 0.31
USP39-202ENST00000409025 FAM27D1Q5T7N8 215 aa17■□□□□ 0.31
USP39-202ENST00000409025 MZT2AQ6P582 158 aa17■□□□□ 0.31
USP39-202ENST00000409025 MDGA2Q7Z553 956 aa17■□□□□ 0.31
USP39-202ENST00000409025 LYSMD2Q8IV50 215 aa17■□□□□ 0.31
USP39-202ENST00000409025 UEVLDQ8IX04 471 aa17■□□□□ 0.31
USP39-202ENST00000409025 MINDY2Q8NBR6 621 aa17■□□□□ 0.31
USP39-202ENST00000409025 TXNDC15Q96J42 360 aa17■□□□□ 0.31
USP39-202ENST00000409025 UBL7Q96S82 380 aaPredicted RBP17■□□□□ 0.31
USP39-202ENST00000409025 KCNK17Q96T54 332 aa17■□□□□ 0.31
USP39-202ENST00000409025 MIXL1Q9H2W2 232 aa17■□□□□ 0.31
USP39-202ENST00000409025 MED29Q9NX70 200 aa17■□□□□ 0.31
USP39-202ENST00000409025 ANKRD10Q9NXR5 420 aa17■□□□□ 0.31
USP39-202ENST00000409025 TRAPPC4Q9Y296 219 aa17■□□□□ 0.31
USP39-202ENST00000409025 MAGEB3O15480 346 aa16.99■□□□□ 0.31
USP39-202ENST00000409025 SEC14L5O43304 696 aa16.99■□□□□ 0.31
USP39-202ENST00000409025 RPP14O95059 124 aaKnown RBP16.99■□□□□ 0.31
USP39-202ENST00000409025 PPP3R1P63098 170 aa16.99■□□□□ 0.31
USP39-202ENST00000409025 ETFDHQ16134 617 aa16.99■□□□□ 0.31
USP39-202ENST00000409025 LIPNQ5VXI9 398 aa16.99■□□□□ 0.31
USP39-202ENST00000409025 ASB17Q8WXJ9 295 aa16.99■□□□□ 0.31
USP39-202ENST00000409025 FOXN4Q96NZ1 517 aa16.99■□□□□ 0.31
USP39-202ENST00000409025 PDCD1LG2Q9BQ51 273 aa16.99■□□□□ 0.31
USP39-202ENST00000409025 CCDC32Q9BV29 185 aa16.99■□□□□ 0.31
USP39-202ENST00000409025 MRPL22Q9NWU5 206 aaKnown RBP16.99■□□□□ 0.31
USP39-202ENST00000409025 B3GAT1Q9P2W7 334 aa16.99■□□□□ 0.31
USP39-202ENST00000409025 COMMD3Q9UBI1 195 aa16.99■□□□□ 0.31
USP39-202ENST00000409025 KCNG2Q9UJ96 466 aa16.99■□□□□ 0.31
USP39-202ENST00000409025 COA3Q9Y2R0 106 aaPredicted RBP16.99■□□□□ 0.31
USP39-202ENST00000409025 LOC101059948A0A1B0GTJ6 334 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 HSPB2A8KAH6 182 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 SULT2B1O00204 365 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 LRP3O75074 770 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 UPK3AO75631 287 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 ARL6IP5O75915 188 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 ABHD16AO95870 558 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 RPS27P42677 84 aaKnown RBP16.98■□□□□ 0.31
USP39-202ENST00000409025 BIDP55957 195 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 ADAM8P78325 824 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 SLC35A1P78382 337 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 OXA1LQ15070 435 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 HSPB2Q16082 182 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 RAET1LQ5VY80 246 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 FAM83FQ8NEG4 500 aaPredicted RBP16.98■□□□□ 0.31
USP39-202ENST00000409025 ACOT12Q8WYK0 555 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 DIRAS2Q96HU8 199 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 THOC3Q96J01 351 aaKnown RBP16.98■□□□□ 0.31
USP39-202ENST00000409025 ZNF281Q9Y2X9 895 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 V9GYH0 126 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 PCSK5Q92824 1860 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 PRR33A8MZF0 331 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 STMND1H3BQB6 276 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 ZIC3O60481 467 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 SPARCP09486 303 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 NANOS3P60323 173 aaKnown RBP16.98■□□□□ 0.31
USP39-202ENST00000409025 RPS11P62280 158 aaKnown RBP eCLIP16.98■□□□□ 0.31
USP39-202ENST00000409025 ALKBH1Q13686 389 aaKnown RBP16.98■□□□□ 0.31
USP39-202ENST00000409025 HBMQ6B0K9 141 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 TMEM225Q6GV28 225 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 SLC18B1Q6NT16 456 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 JMJD6Q6NYC1 403 aaPredicted RBP16.98■□□□□ 0.31
USP39-202ENST00000409025 TMPPEQ6ZT21 453 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.98■□□□□ 0.31
USP39-202ENST00000409025 ABTB1Q969K4 478 aaPredicted RBP16.98■□□□□ 0.31
USP39-202ENST00000409025 RNF166Q96A37 237 aaPredicted RBP16.98■□□□□ 0.31
USP39-202ENST00000409025 MIB2Q96AX9 1013 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 TTYH2Q9BSA4 534 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 B3GNT4Q9C0J1 378 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 FAIMQ9NVQ4 179 aa16.98■□□□□ 0.31
USP39-202ENST00000409025 TRAV1-2A0A0B4J238 106 aa16.97■□□□□ 0.31
USP39-202ENST00000409025 ZNF17P17021 662 aa16.97■□□□□ 0.31
USP39-202ENST00000409025 DNASE1L1P49184 302 aa16.97■□□□□ 0.31
USP39-202ENST00000409025 CYB561P49447 251 aa16.97■□□□□ 0.31
USP39-202ENST00000409025 P2RY4P51582 365 aa16.97■□□□□ 0.31
USP39-202ENST00000409025 ZNF239Q16600 458 aaKnown RBP16.97■□□□□ 0.31
USP39-202ENST00000409025 YIF1BQ5BJH7 314 aa16.97■□□□□ 0.31
USP39-202ENST00000409025 IDNKQ5T6J7 187 aa16.97■□□□□ 0.31
USP39-202ENST00000409025 STEAP3Q658P3 488 aa16.97■□□□□ 0.31
USP39-202ENST00000409025 TRILQ7L0X0 811 aa16.97■□□□□ 0.31
USP39-202ENST00000409025 BEST3Q8N1M1 668 aa16.97■□□□□ 0.31
USP39-202ENST00000409025 PSMF1Q92530 271 aa16.97■□□□□ 0.31
USP39-202ENST00000409025 PHYHIPQ92561 330 aa16.97■□□□□ 0.31
USP39-202ENST00000409025 OXGR1Q96P68 337 aa16.97■□□□□ 0.31
USP39-202ENST00000409025 ING1Q9UK53 422 aaPredicted RBP16.97■□□□□ 0.31
USP39-202ENST00000409025 MRPS18BQ9Y676 258 aaKnown RBP16.97■□□□□ 0.31
USP39-202ENST00000409025 KHDRBS3O75525 346 aaKnown RBP16.96■□□□□ 0.31
USP39-202ENST00000409025 PMS2P2O95744 297 aa16.96■□□□□ 0.31
USP39-202ENST00000409025 UCHL1P09936 223 aa16.96■□□□□ 0.31
USP39-202ENST00000409025 PSKH1P11801 424 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms