RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 HDHD5Q9BXW7 423 aa7.32□□□□□ -1.24
BRCC3-205ENST00000399026 OR10A4Q9H209 315 aa7.32□□□□□ -1.24
BRCC3-205ENST00000399026 LIME1Q9H400 295 aa7.32□□□□□ -1.24
BRCC3-205ENST00000399026 UBTD1Q9HAC8 227 aa7.32□□□□□ -1.24
BRCC3-205ENST00000399026 KRCC1Q9NPI7 259 aaPredicted RBP7.32□□□□□ -1.24
BRCC3-205ENST00000399026 TMEM5Q9Y2B1 443 aa7.32□□□□□ -1.24
BRCC3-205ENST00000399026 HIF3AQ9Y2N7 669 aa7.32□□□□□ -1.24
BRCC3-205ENST00000399026 ADAM18Q9Y3Q7 739 aa7.32□□□□□ -1.24
BRCC3-205ENST00000399026 SLC25A15Q9Y619 301 aa7.32□□□□□ -1.24
BRCC3-205ENST00000399026 U3KQV3 271 aa7.32□□□□□ -1.24
BRCC3-205ENST00000399026 RAI1Q7Z5J4 1906 aaPredicted RBP7.32□□□□□ -1.24
BRCC3-205ENST00000399026 TCRBV3S1A0A5B6 114 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 FAM221AA4D161 298 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 ZNF503-AS2A6NEH8 195 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 UNC119BA6NIH7 251 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 OR6C65A6NJZ3 312 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 AQP12BA6NM10 295 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 M0R1B8 84 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 TNFRSF11BO00300 401 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 ATP5HO75947 161 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 SLC2A10O95528 541 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 PLAUP00749 431 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 IGHG1P01857 330 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 IGHMP01871 453 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 RPLP1P05386 114 aaKnown RBP7.31□□□□□ -1.24
BRCC3-205ENST00000399026 TSPAN19P0C672 248 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 RAP2AP10114 183 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 EPHA1P21709 976 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 RPL4P36578 427 aaKnown RBP7.31□□□□□ -1.24
BRCC3-205ENST00000399026 ACVR1BP36896 505 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 CAPZA2P47755 286 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 RASSF2P50749 326 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 IST1P53990 364 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 SMIM11AP58511 58 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 FXYD6P3P58550 94 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 CTXN1P60606 82 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 ERVK-25P63136 954 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 BSPH1Q075Z2 132 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 CD47Q08722 323 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 ZBED5Q49AG3 693 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 BEX5Q5H9J7 111 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 C1orf146Q5VVC0 180 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 ADAM5Q6NVV9 412 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 PGBD2Q6P3X8 592 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 TMPRSS11FQ6ZWK6 438 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 PIWIL3Q7Z3Z3 882 aaKnown RBP7.31□□□□□ -1.24
BRCC3-205ENST00000399026 ZER1Q7Z7L7 766 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 CDH24Q86UP0 819 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 AQP12AQ8IXF9 295 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 CDK20Q8IZL9 346 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 WDR31Q8NA23 367 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 C1orf162Q8NEQ5 155 aaPredicted RBP7.31□□□□□ -1.24
BRCC3-205ENST00000399026 OR4C15Q8NGM1 316 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 OR6X1Q8NH79 312 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 HSD17B8Q92506 261 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 HDAC2Q92769 488 aaKnown RBP7.31□□□□□ -1.24
BRCC3-205ENST00000399026 NEUROG1Q92886 237 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 TMEM54Q969K7 222 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 ZNF566Q969W8 418 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 RASD2Q96D21 266 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 MUCL1Q96DR8 90 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 SLC25A44Q96H78 314 aaPredicted RBP7.31□□□□□ -1.24
BRCC3-205ENST00000399026 ADAD1Q96M93 576 aaKnown RBP7.31□□□□□ -1.24
BRCC3-205ENST00000399026 CHID1Q9BWS9 393 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 REEP1Q9H902 201 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 B3GAT2Q9NPZ5 323 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 SLC17A5Q9NRA2 495 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 TMCC3Q9ULS5 477 aa7.31□□□□□ -1.24
BRCC3-205ENST00000399026 SAMHD1Q9Y3Z3 626 aaKnown RBP7.31□□□□□ -1.24
BRCC3-205ENST00000399026 NOTCH2Q04721 2471 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 IGKV1D-43A0A0B4J1Z2 117 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 TEX13CA0A0J9YWL9 993 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 A6NHS1 94 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 ZNF99A8MXY4 864 aaPredicted RBP7.3□□□□□ -1.24
BRCC3-205ENST00000399026 RPL36A-HNRNPH2H7BZ11 118 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 FKBP6O75344 327 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 TRMUO75648 421 aaKnown RBP7.3□□□□□ -1.24
BRCC3-205ENST00000399026 CCNB2O95067 398 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 PPP1R3DO95685 299 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 CST1P01037 141 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 CELA3BP08861 270 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 FPR3P25089 353 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 SH3BGRP55822 239 aaPredicted RBP7.3□□□□□ -1.24
BRCC3-205ENST00000399026 UBE2NP61088 152 aaKnown RBP7.3□□□□□ -1.24
BRCC3-205ENST00000399026 RPL27P61353 136 aaKnown RBP7.3□□□□□ -1.24
BRCC3-205ENST00000399026 TGFBR3Q03167 851 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 MESTQ5EB52 335 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 NCMAPQ5T1S8 102 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 ARMC4Q5T2S8 1044 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 OR2T5Q6IEZ7 315 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 OR7E24Q6IFN5 339 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 ANKRD16Q6P6B7 361 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 PAMR1Q6UXH9 720 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 ZNF813Q6ZN06 617 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 ZNF704Q6ZNC4 412 aaPredicted RBP7.3□□□□□ -1.24
BRCC3-205ENST00000399026 ASRGL1Q7L266 308 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 HDDC2Q7Z4H3 204 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 MYPOPQ86VE0 399 aaPredicted RBP7.3□□□□□ -1.24
BRCC3-205ENST00000399026 C17orf78Q8N4C9 275 aa7.3□□□□□ -1.24
BRCC3-205ENST00000399026 OR2T29Q8NH02 315 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms