RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 PIMREGQ9BSJ6 248 aa11.9□□□□□ -0.5
CXCL12-205ENST00000395794 NSRP1Q9H0G5 558 aaKnown RBP11.9□□□□□ -0.5
CXCL12-205ENST00000395794 RNF121Q9H920 327 aa11.9□□□□□ -0.5
CXCL12-205ENST00000395794 TMEM38BQ9NVV0 291 aa11.9□□□□□ -0.5
CXCL12-205ENST00000395794 NSD1Q96L73 2696 aaPredicted RBP11.89□□□□□ -0.51
CXCL12-205ENST00000395794 LOC390937A0A1W2PQ73 354 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 CRLF1O75462 422 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 GMNNO75496 209 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 LY6HO94772 140 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 PTHP01270 115 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 SAGP10523 405 aaPredicted RBP11.89□□□□□ -0.51
CXCL12-205ENST00000395794 ACADSP16219 412 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 ZNF14P17017 642 aaPredicted RBP11.89□□□□□ -0.51
CXCL12-205ENST00000395794 USF1P22415 310 aaPredicted RBP11.89□□□□□ -0.51
CXCL12-205ENST00000395794 RPS23P62266 143 aaKnown RBP11.89□□□□□ -0.51
CXCL12-205ENST00000395794 KRTAP1-1Q07627 177 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 TRAM2Q15035 370 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 TMEM249Q2WGJ8 235 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 SLC36A2Q495M3 483 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 IFI44LQ53G44 452 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 LRFN4Q6PJG9 635 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 HACD2Q6Y1H2 254 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 SLC16A14Q7RTX9 510 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 CYP4Z1Q86W10 505 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 CDK20Q8IZL9 346 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 ANKS4BQ8N8V4 417 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 SYT14Q8NB59 555 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 NEU4Q8WWR8 484 aaPredicted RBP11.89□□□□□ -0.51
CXCL12-205ENST00000395794 LIPHQ8WWY8 451 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 GEMIN6Q8WXD5 167 aaKnown RBP11.89□□□□□ -0.51
CXCL12-205ENST00000395794 MCHR2Q969V1 340 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 FAM162AQ96A26 154 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 BPIFA2Q96DR5 249 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 KCNN2Q9H2S1 579 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 C20orf141Q9NUB4 165 aa11.89□□□□□ -0.51
CXCL12-205ENST00000395794 SLC22A23A1A5C7 686 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 SH3PXD2BA1X283 911 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 GMNCA6NCL1 334 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 A8MV72 311 aaPredicted RBP11.88□□□□□ -0.51
CXCL12-205ENST00000395794 GPRIN2O60269 458 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 MGRN1O60291 552 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 SERPINA5P05154 406 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 PATE4P0C8F1 98 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 IFI30P13284 250 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 ZNF35P13682 527 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 YAP1P46937 504 aaKnown RBP11.88□□□□□ -0.51
CXCL12-205ENST00000395794 PLP2Q04941 152 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 RAB39AQ14964 217 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 LAPTM4AQ15012 233 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 TAF11Q15544 211 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 NRN1LQ496H8 165 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 IQCCQ4KMZ1 466 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 ALG10Q5BKT4 473 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 RRM2BQ7LG56 351 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 VTCN1Q7Z7D3 282 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 CPLX4Q7Z7G2 160 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 NOXO1Q8NFA2 376 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 OR4K5Q8NGD3 323 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 MOSPD2Q8NHP6 518 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 ASB10Q8WXI3 467 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 KCTD12Q96CX2 325 aaKnown RBP11.88□□□□□ -0.51
CXCL12-205ENST00000395794 ZNF347Q96SE7 839 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 DOK1Q99704 481 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 SH3GL3Q99963 347 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 KCTD14Q9BQ13 255 aaPredicted RBP11.88□□□□□ -0.51
CXCL12-205ENST00000395794 FAM107BQ9H098 131 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 LRMDAQ9H2I8 198 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 C1orf198Q9H425 327 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 A4GNTQ9UNA3 340 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 HIVEP2P31629 2446 aa11.88□□□□□ -0.51
CXCL12-205ENST00000395794 IQCMA0A1B0GVH7 501 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 NPIPB13A6NJU9 1138 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 NPIPB4C9JG80 1138 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 NME4O00746 187 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 TRMUO75648 421 aaKnown RBP11.87□□□□□ -0.51
CXCL12-205ENST00000395794 SERPINA1P01009 418 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 GLRXP35754 106 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 GUCA1AP43080 201 aaPredicted RBP11.87□□□□□ -0.51
CXCL12-205ENST00000395794 EVX1P49640 407 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 GSK3BP49841 420 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 SELENOVP59797 346 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 VLDLRP98155 873 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 MYBPC1Q00872 1141 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 CD47Q08722 323 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 GGTLC2Q14390 218 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 HIST3H3Q16695 136 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 CYB5R2Q6BCY4 276 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 ZNF730Q6ZMV8 503 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 CBLL1Q75N03 491 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 TREML1Q86YW5 311 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 RNF113BQ8IZP6 322 aaKnown RBP11.87□□□□□ -0.51
CXCL12-205ENST00000395794 OFCC1Q8IZS5 231 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 SLC30A7Q8NEW0 376 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 OR1J2Q8NGS2 313 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 MRPL24Q96A35 216 aaKnown RBP11.87□□□□□ -0.51
CXCL12-205ENST00000395794 RBP7Q96R05 134 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 MRPL13Q9BYD1 178 aaKnown RBP11.87□□□□□ -0.51
CXCL12-205ENST00000395794 NDEL1Q9GZM8 345 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 TXNIPQ9H3M7 391 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 CDH20Q9HBT6 801 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms