RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 NME2P22392 152 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 S100A5P33763 92 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 OR12D2P58182 307 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 ARSKQ6UWY0 536 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 SULF2Q8IWU5 870 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 TIGD4Q8IY51 512 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 RFLNBQ8N5W9 214 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 OR2M3Q8NG83 312 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 SCMH1Q96GD3 660 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 MNTQ99583 582 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 NPAS1Q99742 590 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 OR11A1Q9GZK7 315 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 TXNIPQ9H3M7 391 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 RPRD1BQ9NQG5 326 aaKnown RBP13.54□□□□□ -0.24
SCAF11-204ENST00000395454 QPCTLQ9NXS2 382 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 GALNT8Q9NY28 637 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 ZNF346Q9UL40 294 aaKnown RBP13.54□□□□□ -0.24
SCAF11-204ENST00000395454 SPTA1P02549 2419 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 E9PI62 339 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 KLRC4-KLRK1H3BQV0 150 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 RGS9O75916 674 aaPredicted RBP13.54□□□□□ -0.24
SCAF11-204ENST00000395454 SDC2P34741 201 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 RPL27P61353 136 aaKnown RBP13.54□□□□□ -0.24
SCAF11-204ENST00000395454 FOXF1Q12946 379 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 ZNF169Q14929 603 aaPredicted RBP13.54□□□□□ -0.24
SCAF11-204ENST00000395454 CCDC58Q4VC31 144 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 POMZP3Q6PJE2 187 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 Q6ZS92 163 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 SLC16A9Q7RTY1 509 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 SYT14Q8NB59 555 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 OR51L1Q8NGJ5 315 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 PELI1Q96FA3 418 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 MRPL48Q96GC5 212 aaKnown RBP13.54□□□□□ -0.24
SCAF11-204ENST00000395454 TMED9Q9BVK6 235 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 KCNN2Q9H2S1 579 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 SNTG1Q9NSN8 517 aa13.54□□□□□ -0.24
SCAF11-204ENST00000395454 VSX1Q9NZR4 365 aaPredicted RBP13.54□□□□□ -0.24
SCAF11-204ENST00000395454 PLEKHB1Q9UF11 243 aaPredicted RBP13.54□□□□□ -0.24
SCAF11-204ENST00000395454 SELENOFO60613 162 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 ADH6P28332 368 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 RFC3P40938 356 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 IFITM3Q01628 133 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 PXKQ7Z7A4 578 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 OR6V1Q8N148 313 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 WDSUB1Q8N9V3 476 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 OR2M7Q8NG81 312 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 ZNF417Q8TAU3 575 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 POC1BQ8TC44 478 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 GNRHR2Q96P88 292 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 ZNF587Q96SQ5 575 aaPredicted RBP13.53□□□□□ -0.24
SCAF11-204ENST00000395454 FAM173AQ9BQD7 235 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 SLC25A18Q9H1K4 315 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 LUZP4Q9P127 313 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 COPS3Q9UNS2 423 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 UGT2A1Q9Y4X1 527 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 FKBP7Q9Y680 259 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 ALPK2Q86TB3 2170 aa13.53□□□□□ -0.24
SCAF11-204ENST00000395454 PINLYPA6NC86 204 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 DCTN6O00399 190 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 TRIM3O75382 744 aaPredicted RBP13.52□□□□□ -0.24
SCAF11-204ENST00000395454 RENP00797 406 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 NAA10P41227 235 aaPredicted RBP13.52□□□□□ -0.24
SCAF11-204ENST00000395454 CENPAP49450 140 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 MEOX1P50221 254 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 ZNF41P51814 821 aaPredicted RBP13.52□□□□□ -0.24
SCAF11-204ENST00000395454 RUNX1T1Q06455 604 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 LY6DQ14210 128 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 CDK5R1Q15078 307 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 ACKR1Q16570 336 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.52□□□□□ -0.24
SCAF11-204ENST00000395454 TEX19Q8NA77 164 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 ADPRHL1Q8NDY3 354 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 OR1J4Q8NGS1 313 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 OR6K6Q8NGW6 343 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 HAVCR2Q8TDQ0 301 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 SMAP2Q8WU79 429 aaPredicted RBP13.52□□□□□ -0.24
SCAF11-204ENST00000395454 SLC39A7Q92504 469 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 DDIT4LQ96D03 193 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 TMEM41AQ96HV5 264 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 HDHD5Q9BXW7 423 aa13.52□□□□□ -0.24
SCAF11-204ENST00000395454 BOKQ9UMX3 212 aaPredicted RBP13.52□□□□□ -0.24
SCAF11-204ENST00000395454 A0A1W2PNV4 684 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 SHISA3A0PJX4 238 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 PRSS37A4D1T9 235 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 J3QLW9 94 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 CTDSP2O14595 271 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 EFNA2O43921 213 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 ZNF19P17023 458 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 CFL1P23528 166 aaKnown RBP13.52□□□□□ -0.25
SCAF11-204ENST00000395454 FKBP2P26885 142 aaKnown RBP13.52□□□□□ -0.25
SCAF11-204ENST00000395454 PYCR1P32322 319 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 TGM4P49221 684 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 MTNR1BP49286 362 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 RGS21Q2M5E4 152 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 SLC6A19Q695T7 634 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 CDC20BQ86Y33 519 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 MS4A15Q8N5U1 240 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 NEIL3Q8TAT5 605 aa13.52□□□□□ -0.25
SCAF11-204ENST00000395454 RNF166Q96A37 237 aaPredicted RBP13.52□□□□□ -0.25
SCAF11-204ENST00000395454 SLC25A36Q96CQ1 311 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms