RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 MYOTQ9UBF9 498 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 B9D1Q9UPM9 204 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 MSRB2Q9Y3D2 182 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 CABIN1Q9Y6J0 2220 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 TMEM200CA6NKL6 621 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 FAM47E-STBD1D6RA91 191 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 C11orf98E9PRG8 122 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 MAGEB4O15481 346 aaPredicted RBP9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 UPK3AO75631 287 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 ABHD16AO95870 558 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 KLK3P07288 261 aaPredicted RBP9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 FBXO45P0C2W1 286 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 EPXP11678 715 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 ALOX5APP20292 161 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 PSMB10P40306 273 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 PITPNBP48739 271 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 DAP3P51398 398 aaKnown RBP9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 ZNF41P51814 821 aaPredicted RBP9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 TPTEP56180 551 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 PITPNAQ00169 270 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 ZFP36L1Q07352 338 aaKnown RBP9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 RASGEF1BQ0VAM2 473 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 P2RY14Q15391 338 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 NTRK2Q16620 822 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 Q499Y3 187 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 C1QL3Q5VWW1 255 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 FDX2Q6P4F2 183 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 LYPD8Q6UX82 237 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 PM20D2Q8IYS1 436 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 ZNF454Q8N9F8 522 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 OR13C5Q8NGS8 318 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 OR5AK2Q8NH90 309 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 OTOSQ8NHW6 89 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 ZNF417Q8TAU3 575 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 ADAMTS14Q8WXS8 1223 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 TSSK2Q96PF2 358 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 OR14A2Q96R54 314 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 ZNF587Q96SQ5 575 aaPredicted RBP9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 DEFB126Q9BYW3 111 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 COMMD4Q9H0A8 199 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 SLITRK2Q9H156 845 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 FANCFQ9NPI8 374 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 FSCN3Q9NQT6 498 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 RBFOX1Q9NWB1 397 aaKnown RBP9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 MRM2Q9UI43 246 aaKnown RBP9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 SPATA2Q9UM82 520 aa9.44□□□□□ -0.9
POLR2J3-201ENST00000379340 TRBV5-5A0A0J9YX44 114 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 TVP23AA6NH52 213 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 TMEM212A6NML5 194 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 C17orf51A8MQB3 221 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 FAM171A2A8MVW0 826 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 C9J4A7 227 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 H7C1C5 153 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 DCTN6O00399 190 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 TP53I11O14683 189 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 PLA2G10O15496 165 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 LYRM1O43325 122 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 SSX4O60224 188 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 AKR7A3O95154 331 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 RAF1P04049 648 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 EIF4EP06730 217 aaKnown RBP9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 GP1BAP07359 652 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 CD63P08962 238 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 OR8G3PP0DMU2 310 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 SRMP19623 302 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 AHCYP23526 432 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 FKBP2P26885 142 aaKnown RBP9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 OR10A3P58181 314 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 LCN6P62502 163 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 MC2RQ01718 297 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 PUDPQ08623 228 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 EXT1Q16394 746 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 SLC25A35Q3KQZ1 300 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 TRIM61Q5EBN2 209 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 CEP78Q5JTW2 689 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 LIPNQ5VXI9 398 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 TMEM81Q6P7N7 255 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 LYPD4Q6UWN0 246 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 SPATC1Q76KD6 591 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 BMPERQ8N8U9 685 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 ADPRHL1Q8NDY3 354 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 DUSP18Q8NEJ0 188 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 OR4M1Q8NGD0 313 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 ELP5Q8TE02 316 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 RFT1Q96AA3 541 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 NXPE2Q96DL1 559 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 DERL3Q96Q80 235 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 CTRCQ99895 268 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 PDCD1LG2Q9BQ51 273 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 WACQ9BTA9 647 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 RNF121Q9H920 327 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 APMAPQ9HDC9 416 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 SERINC1Q9NRX5 453 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 ALKBH4Q9NXW9 302 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 MALT1Q9UDY8 824 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 IKZF2Q9UKS7 526 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 WIF1Q9Y5W5 379 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 LOC400499M0QZD8 3231 aa9.43□□□□□ -0.9
POLR2J3-201ENST00000379340 NAV2Q8IVL1 2488 aa9.42□□□□□ -0.9
POLR2J3-201ENST00000379340 IGLV1-36A0A0B4J1U3 117 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms