RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 RARRES3Q9UL19 164 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 NPFFR2Q9Y5X5 522 aa14.79□□□□□ -0.04
NPHP3-201ENST00000337331 SPAG17Q6Q759 2223 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 F13BP05160 661 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 FGF2P09038 288 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 CASP6P55212 293 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 MRPS10P82664 201 aaKnown RBP14.78□□□□□ -0.04
NPHP3-201ENST00000337331 COTL1Q14019 142 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 EIF2B1Q14232 305 aaKnown RBP14.78□□□□□ -0.04
NPHP3-201ENST00000337331 GNMTQ14749 295 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 ZNF383Q8NA42 475 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 PHB2Q99623 299 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 SMIM3Q9BZL3 60 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 C8orf33Q9H7E9 229 aaPredicted RBP14.78□□□□□ -0.04
NPHP3-201ENST00000337331 ATG4BQ9Y4P1 393 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 TRIP11Q15643 1979 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 KIR2DS5A0A0G2JLQ3 304 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 A0A0G2JNG1 304 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 PYCARD-AS1I3L0S3 204 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 KIR2DS3K7RE56 304 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 AQP8O94778 261 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 CSF1P09603 554 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 CRABP1P29762 137 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 CRMP1Q14194 572 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 KIR2DS5Q14953 304 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 ZNF750Q32MQ0 723 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 LDLRAD3Q86YD5 345 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 OR14A2Q96R54 314 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 ZNF587Q96SQ5 575 aaPredicted RBP14.78□□□□□ -0.04
NPHP3-201ENST00000337331 OPA3Q9H6K4 179 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 ZNF442Q9H7R0 627 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 ISG20L2Q9H9L3 353 aaKnown RBP14.78□□□□□ -0.04
NPHP3-201ENST00000337331 CDC14CA4D256 554 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 ARGFXA6NJG6 315 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 ZNF736B4DX44 427 aaPredicted RBP14.78□□□□□ -0.04
NPHP3-201ENST00000337331 SNU13P55769 128 aaKnown RBP14.78□□□□□ -0.04
NPHP3-201ENST00000337331 FAM78AQ5JUQ0 283 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 FRMD1Q8N878 549 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 RLN3Q8WXF3 142 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 TNFRSF13CQ96RJ3 184 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 JAM3Q9BX67 310 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 INPP5EQ9NRR6 644 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 CA10Q9NS85 328 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 TM7SF3Q9NS93 570 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 PLPP1O14494 284 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 FZD6O60353 706 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 OR8G3PP0DMU2 310 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 ITGB8P26012 769 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 SMAD2Q15796 467 aaKnown RBP14.78□□□□□ -0.04
NPHP3-201ENST00000337331 AFMIDQ63HM1 303 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 B3GNTL1Q67FW5 361 aaPredicted RBP14.78□□□□□ -0.04
NPHP3-201ENST00000337331 CMTM4Q8IZR5 234 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 SLC16A11Q8NCK7 471 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 MRI1Q9BV20 369 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 BRWD3Q6RI45 1802 aa14.78□□□□□ -0.04
NPHP3-201ENST00000337331 MAST2Q6P0Q8 1798 aa14.77□□□□□ -0.04
NPHP3-201ENST00000337331 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.77□□□□□ -0.04
NPHP3-201ENST00000337331 ZC3H12DA2A288 527 aaKnown RBP14.77□□□□□ -0.04
NPHP3-201ENST00000337331 PRAMEF26H0Y7S4 382 aa14.77□□□□□ -0.04
NPHP3-201ENST00000337331 GABARAPH6UMI1 98 aa14.77□□□□□ -0.04
NPHP3-201ENST00000337331 IFNA2P01563 188 aa14.77□□□□□ -0.04
NPHP3-201ENST00000337331 EPHA4P54764 986 aa14.77□□□□□ -0.04
NPHP3-201ENST00000337331 PDE7AQ13946 482 aa14.77□□□□□ -0.04
NPHP3-201ENST00000337331 LAS2Q8IYD9 372 aa14.77□□□□□ -0.04
NPHP3-201ENST00000337331 KDM8Q8N371 416 aa14.77□□□□□ -0.04
NPHP3-201ENST00000337331 FAM24BQ8N5W8 94 aa14.77□□□□□ -0.04
NPHP3-201ENST00000337331 OR5H2Q8NGV7 314 aa14.77□□□□□ -0.04
NPHP3-201ENST00000337331 PDXPQ96GD0 296 aa14.77□□□□□ -0.04
NPHP3-201ENST00000337331 SPOCK3Q9BQ16 436 aa14.77□□□□□ -0.04
NPHP3-201ENST00000337331 EDEM2Q9BV94 578 aa14.77□□□□□ -0.04
NPHP3-201ENST00000337331 ZNF275Q9NSD4 429 aaPredicted RBP14.77□□□□□ -0.04
NPHP3-201ENST00000337331 KNG1P01042 644 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 SBK2P0C263 348 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 JMJD7P0C870 316 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 HOXB3P14651 431 aaPredicted RBP14.77□□□□□ -0.05
NPHP3-201ENST00000337331 RAG2P55895 527 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 CXADRP78310 365 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 SKP2Q13309 424 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 OR7E24Q6IFN5 339 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 FAM3CQ92520 227 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 BORCS8Q96FH0 119 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 LMF2Q9BU23 707 aaKnown RBP14.77□□□□□ -0.05
NPHP3-201ENST00000337331 TESQ9UGI8 421 aaKnown RBP14.77□□□□□ -0.05
NPHP3-201ENST00000337331 RNF215Q9Y6U7 377 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 EIF1BO60739 113 aaKnown RBP14.77□□□□□ -0.05
NPHP3-201ENST00000337331 RECKO95980 971 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 EIF1P41567 113 aaKnown RBP14.77□□□□□ -0.05
NPHP3-201ENST00000337331 SLC6A8P48029 635 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 MMP15P51511 669 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 KIAA0040Q15053 153 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 TMEM31Q5JXX7 168 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 UQCC3Q6UW78 93 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 KCNRGQ8N5I3 272 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 RBM24Q9BX46 236 aaKnown RBP14.77□□□□□ -0.05
NPHP3-201ENST00000337331 NKX2-4Q9H2Z4 354 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 APMAPQ9HDC9 416 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 PRSS16Q9NQE7 514 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 PCOLCE2Q9UKZ9 415 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 CA14Q9ULX7 337 aa14.77□□□□□ -0.05
NPHP3-201ENST00000337331 A8MXK9 166 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms