RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 STT3BQ8TCJ2 826 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 PIGKQ92643 395 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 ELOVL3Q9HB03 270 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 TAS2R10Q9NYW0 307 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 NUP210LQ5VU65 1888 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 TRBV5-5A0A0J9YX44 114 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 C7orf66A4D0T2 115 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 SPARCP09486 303 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 H2AFB2P0C5Z0 115 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 POU3F3P20264 500 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 CDK2P24941 298 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 KIR3DL2P43630 455 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 FBXW4P57775 412 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 RNF4P78317 190 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 GPLD1P80108 840 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 WDR38Q5JTN6 314 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 TMEM69Q5SWH9 247 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 FAAP20Q6NZ36 180 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 MDGA2Q7Z553 956 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 LRRTM1Q86UE6 522 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 ZNF417Q8TAU3 575 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 GIMAP1Q8WWP7 306 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 S100A16Q96FQ6 103 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 ZNF587Q96SQ5 575 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 COMMD4Q9H0A8 199 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 DUSP15Q9H1R2 295 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 FOXJ3Q9UPW0 622 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 SLC22A13Q9Y226 551 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 FKBP7Q9Y680 259 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 TRIOBPQ9H2D6 2365 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 ANXA2P2A6NMY6 339 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 CTDSPLO15194 276 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 OR6A2O95222 327 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 TIAF1O95411 115 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 ANXA2P07355 339 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 DCNP07585 359 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 CTLA4P16410 223 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 MAPK3P27361 379 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 PTH2RP49190 550 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 GSG1Q2KHT4 349 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 NUP54Q7Z3B4 507 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 GTPBP2Q9BX10 602 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 MRPL22Q9NWU5 206 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 A8MVM7 634 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 NPIPB7O75200 414 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 ZNF780AO75290 641 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 MPZL1O95297 269 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 WNT11O96014 354 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 FBXO45P0C2W1 286 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 EGR3Q06889 387 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 ST3GAL2Q16842 350 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 ZNF574Q6ZN55 896 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 DND1Q8IYX4 353 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 ZNF519Q8TB69 540 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 TMEM14AQ9Y6G1 99 aa16.55■□□□□ 0.24
SHKBP1-201ENST00000291842 CPED1A4D0V7 1026 aa16.54■□□□□ 0.24
SHKBP1-201ENST00000291842 DOK2O60496 412 aa16.54■□□□□ 0.24
SHKBP1-201ENST00000291842 TSC22D2O75157 780 aa16.54■□□□□ 0.24
SHKBP1-201ENST00000291842 KHDRBS3O75525 346 aaKnown RBP16.54■□□□□ 0.24
SHKBP1-201ENST00000291842 MT-ATP6P00846 226 aa16.54■□□□□ 0.24
SHKBP1-201ENST00000291842 LCN1P31025 176 aa16.54■□□□□ 0.24
SHKBP1-201ENST00000291842 CCR9P51686 369 aa16.54■□□□□ 0.24
SHKBP1-201ENST00000291842 SLC22A10Q63ZE4 541 aa16.54■□□□□ 0.24
SHKBP1-201ENST00000291842 GRINAQ7Z429 371 aa16.54■□□□□ 0.24
SHKBP1-201ENST00000291842 SPEM1Q8N4L4 309 aa16.54■□□□□ 0.24
SHKBP1-201ENST00000291842 TSEN15Q8WW01 171 aaKnown RBP16.54■□□□□ 0.24
SHKBP1-201ENST00000291842 DNASE2BQ8WZ79 361 aa16.54■□□□□ 0.24
SHKBP1-201ENST00000291842 CMTM3Q96MX0 182 aa16.54■□□□□ 0.24
SHKBP1-201ENST00000291842 HRASLSQ9HDD0 168 aa16.54■□□□□ 0.24
SHKBP1-201ENST00000291842 COL5A1P20908 1838 aaPredicted RBP16.54■□□□□ 0.24
SHKBP1-201ENST00000291842 SOX1O00570 391 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 PLPP3O14495 311 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 ZNF254O75437 659 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 PNPP00491 289 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 ART1P52961 327 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 STARD6P59095 220 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 ADAM8P78325 824 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 DYRK1AQ13627 763 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 SHBQ15464 509 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 PRSS42Q7Z5A4 293 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 GLB1L2Q8IW92 636 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 CARFQ8N187 725 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 GPR148Q8TDV2 347 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 FCAMRQ8WWV6 532 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 C4orf45Q96LM5 186 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 DCBLD2Q96PD2 775 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 C20orf85Q9H1P6 137 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 TXNIPQ9H3M7 391 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 KCNK15Q9H427 330 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 ZNF768Q9H5H4 540 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 FSCN3Q9NQT6 498 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 KLHL9Q9P2J3 617 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 VDAC3Q9Y277 283 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 FREM3P0C091 2139 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 TMEM212A6NML5 194 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 GABARAPH6UMI1 98 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 ADAM10O14672 748 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 DXOO77932 396 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 CCKBRP32239 447 aa16.53■□□□□ 0.24
SHKBP1-201ENST00000291842 OR7E24Q6IFN5 339 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms