RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 TMEM272A0A1B0GTI8 110 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 SERTM1A2A2V5 107 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 CPED1A4D0V7 1026 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 SOX1O00570 391 aaPredicted RBP14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 ADAMTS4O75173 837 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 SLC35G6P0C7Q6 338 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 NDUFA6P56556 154 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 OR4K17Q8NGC6 315 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 OR6S1Q8NH40 331 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 NUDCD2Q8WVJ2 157 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 FAM3DQ96BQ1 224 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 FN3KRPQ9HA64 309 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 ST6GALNAC2Q9UJ37 374 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 MRPS23Q9Y3D9 190 aaKnown RBP14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 TET1Q8NFU7 2136 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 TNFSF12O43508 249 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 SELPP16109 830 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 C11orf87Q6NUJ2 197 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 USP50Q70EL3 339 aaPredicted RBP14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 SSX9Q7RTT3 188 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 METTL27Q8N6F8 245 aaPredicted RBP14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 ROBO4Q8WZ75 1007 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 MIB2Q96AX9 1013 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 ZNF558Q96NG5 402 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 SPACA5Q96QH8 159 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 PHB2Q99623 299 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 ZNF649Q9BS31 505 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 TRIM2Q9C040 744 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 INPP5EQ9NRR6 644 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 SCN8AQ9UQD0 1980 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 OR5K4A6NMS3 321 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 JMJD7P0C870 316 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 SKP2Q13309 424 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 C2orf76Q3KRA6 126 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 ACOT7LQ6ZUV0 252 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 ASPGQ86U10 573 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 ZNRF4Q8WWF5 429 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 SUSD6Q92537 303 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 CPEB1Q9BZB8 566 aaKnown RBP14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 SYNDIG1Q9H7V2 258 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 BCL2L11O43521 198 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 MAPK3P27361 379 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 PRKAR1BP31321 381 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 CASRP41180 1078 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 NR0B1P51843 470 aaKnown RBP14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 ACTBP60709 375 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 ACTG1P63261 375 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 EFNB1P98172 346 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 FZD5Q13467 585 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 IRF5Q13568 498 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 ZNF529Q6P280 563 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 GVQW1Q8N7I0 195 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 OR8D1Q8WZ84 308 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 MSRAQ9UJ68 235 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 AQP8O94778 261 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 GLSO94925 669 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 IL5P05113 134 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 FOSL1P15407 271 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 PRDX1Q06830 199 aaKnown RBP14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 ZNHIT3Q15649 155 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 SLC48A1Q6P1K1 146 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 CSNK1A1LQ8N752 337 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 KISS1RQ969F8 398 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 RHOFQ9HBH0 211 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 MMP24Q9Y5R2 645 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 SPACA6W5XKT8 324 aa14.53□□□□□ -0.08
PRPF40B-201ENST00000261897 DCTN6O00399 190 aa14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 ZIC2O95409 532 aaPredicted RBP14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 SFTA3P0C7M3 94 aa14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 SPI1P17947 270 aa14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 SERPINF1P36955 418 aa14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 ARFRP1Q13795 201 aa14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 ABHD17CQ6PCB6 329 aa14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 C5orf46Q6UWT4 87 aa14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 SHISA5Q8N114 240 aa14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 FRMD1Q8N878 549 aa14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 OR5T3Q8NGG3 340 aa14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 OR2L2Q8NH16 312 aa14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 GPR148Q8TDV2 347 aa14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 RNF141Q8WVD5 230 aa14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 INSM2Q96T92 566 aaPredicted RBP14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 STEAP1Q9UHE8 339 aa14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 NPTNQ9Y639 398 aa14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 GBF1Q92538 1859 aa14.52□□□□□ -0.08
PRPF40B-201ENST00000261897 H7C417 338 aa14.52□□□□□ -0.09
PRPF40B-201ENST00000261897 HOXA2O43364 376 aa14.52□□□□□ -0.09
PRPF40B-201ENST00000261897 OR2A4O95047 310 aa14.52□□□□□ -0.09
PRPF40B-201ENST00000261897 TBX6O95947 436 aaPredicted RBP14.52□□□□□ -0.09
PRPF40B-201ENST00000261897 CSTAP01040 98 aa14.52□□□□□ -0.09
PRPF40B-201ENST00000261897 PMP2P02689 132 aa14.52□□□□□ -0.09
PRPF40B-201ENST00000261897 OR13C7P0DN81 318 aa14.52□□□□□ -0.09
PRPF40B-201ENST00000261897 DPP4P27487 766 aa14.52□□□□□ -0.09
PRPF40B-201ENST00000261897 FBXW4P57775 412 aa14.52□□□□□ -0.09
PRPF40B-201ENST00000261897 ACSM1Q08AH1 577 aa14.52□□□□□ -0.09
PRPF40B-201ENST00000261897 ITPRIPL2Q3MIP1 535 aa14.52□□□□□ -0.09
PRPF40B-201ENST00000261897 TMEM215Q68D42 235 aa14.52□□□□□ -0.09
PRPF40B-201ENST00000261897 ZAR1Q86SH2 424 aa14.52□□□□□ -0.09
PRPF40B-201ENST00000261897 OR2L5Q8NG80 312 aa14.52□□□□□ -0.09
PRPF40B-201ENST00000261897 MS4A6EQ96DS6 147 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms