RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 JSRP1Q96MG2 331 aaPredicted RBP8.73□□□□□ -1.01
PHGDH-215ENST00000641371 PHOX2BQ99453 314 aa8.73□□□□□ -1.01
PHGDH-215ENST00000641371 OR51E2Q9H255 320 aa8.73□□□□□ -1.01
PHGDH-215ENST00000641371 SYT4Q9H2B2 425 aa8.73□□□□□ -1.01
PHGDH-215ENST00000641371 PLGRKTQ9HBL7 147 aa8.73□□□□□ -1.01
PHGDH-215ENST00000641371 KLHL9Q9P2J3 617 aa8.73□□□□□ -1.01
PHGDH-215ENST00000641371 IL17BQ9UHF5 180 aa8.73□□□□□ -1.01
PHGDH-215ENST00000641371 LAMP5Q9UJQ1 280 aa8.73□□□□□ -1.01
PHGDH-215ENST00000641371 CDV3Q9UKY7 258 aaKnown RBP8.73□□□□□ -1.01
PHGDH-215ENST00000641371 B9D1Q9UPM9 204 aa8.73□□□□□ -1.01
PHGDH-215ENST00000641371 PEX16Q9Y5Y5 336 aa8.73□□□□□ -1.01
PHGDH-215ENST00000641371 A0A075B6Q4 140 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 ZNF726A6NNF4 738 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 B4DXG7 233 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 ACOT7O00154 380 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 OGG1O15527 345 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 GATBO75879 557 aaKnown RBP8.72□□□□□ -1.01
PHGDH-215ENST00000641371 RGS9O75916 674 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-215ENST00000641371 NEURL1O76050 574 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 APOL3O95236 402 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 GYPBP06028 91 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 MRPL3P09001 348 aaKnown RBP8.72□□□□□ -1.01
PHGDH-215ENST00000641371 CLUP10909 449 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 ZNF823P16415 610 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 CELP19835 753 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 S100A5P33763 92 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 CD96P40200 585 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 AGFG1P52594 562 aaKnown RBP8.72□□□□□ -1.01
PHGDH-215ENST00000641371 LSM3P62310 102 aaKnown RBP8.72□□□□□ -1.01
PHGDH-215ENST00000641371 H3F3AP84243 136 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 POU3F1Q03052 451 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-215ENST00000641371 ZNF85Q03923 595 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 ZNF846Q147U1 533 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 TOMM20Q15388 145 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 OR1C1Q15619 314 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 ZNF829Q3KNS6 432 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-215ENST00000641371 SLC25A25Q6KCM7 469 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 SLC18B1Q6NT16 456 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 DEGS2Q6QHC5 323 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 CDC20BQ86Y33 519 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 KLBQ86Z14 1044 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 OR6V1Q8N148 313 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 OR2M7Q8NG81 312 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 MCFD2Q8NI22 146 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 NDNFQ8TB73 568 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 TBC1D15Q8TC07 691 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 HAS2Q92819 552 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 BORCS5Q969J3 196 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 SMIM19Q96E16 107 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 SLC25A44Q96H78 314 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-215ENST00000641371 C4orf36Q96KX1 117 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 SFXN2Q96NB2 322 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 GNRHR2Q96P88 292 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 KCNK17Q96T54 332 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 TTYH2Q9BSA4 534 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 NXF2Q9GZY0 626 aaKnown RBP8.72□□□□□ -1.01
PHGDH-215ENST00000641371 TSPAN10Q9H1Z9 355 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-215ENST00000641371 SRA1Q9HD15 236 aaKnown RBP8.72□□□□□ -1.01
PHGDH-215ENST00000641371 TXNL4BQ9NX01 149 aaKnown RBP8.72□□□□□ -1.01
PHGDH-215ENST00000641371 KLHL13Q9P2N7 655 aa8.72□□□□□ -1.01
PHGDH-215ENST00000641371 SF3B6Q9Y3B4 125 aaKnown RBP8.72□□□□□ -1.01
PHGDH-215ENST00000641371 MRPS18BQ9Y676 258 aaKnown RBP8.72□□□□□ -1.01
PHGDH-215ENST00000641371 FRYLO94915 3013 aa8.71□□□□□ -1.01
PHGDH-215ENST00000641371 IGLV1-36A0A0B4J1U3 117 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 METTL15A6NJ78 407 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 LRRC3CA6NJW4 275 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 CLDN25C9JDP6 229 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 J3QLW9 94 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 EFNA2O43921 213 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 NME2P1O60361 137 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 SLC16A7O60669 478 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 ZNF254O75437 659 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 GPX5O75715 221 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 ARL6IP5O75915 188 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 AQP8O94778 261 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 AKR7A3O95154 331 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 TFP02787 698 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 HPNP05981 417 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 IFNGR1P15260 489 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 ZNF19P17023 458 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 NME2P22392 152 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 NR4A1P22736 598 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 MAPK3P27361 379 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-215ENST00000641371 GDF1P27539 372 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 SFTPDP35247 375 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 GUCA1AP43080 201 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-215ENST00000641371 RANBP1P43487 201 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 DNASE1L1P49184 302 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 ENTPD1P49961 510 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 CLRN1P58418 232 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 RPS3AP61247 264 aaKnown RBP8.71□□□□□ -1.02
PHGDH-215ENST00000641371 SIRPAP78324 504 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 CDK5R1Q15078 307 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 BCL2A1Q16548 175 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 TBC1D25Q3MII6 688 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 ZNF468Q5VIY5 522 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-215ENST00000641371 DMKNQ6E0U4 476 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-215ENST00000641371 RHOUQ7L0Q8 258 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 SLC22A16Q86VW1 577 aa8.71□□□□□ -1.02
PHGDH-215ENST00000641371 TPRA1Q86W33 373 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms