RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 POU2F3Q9UKI9 436 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 GMEB1Q9Y692 573 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 IGKV1-8A0A0C4DH67 115 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 LRRN3E7EW58 273 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 IRF2P14316 349 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 RAB6AP20340 208 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 ENTPD1P49961 510 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 RAB14P61106 215 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 CXADRP78310 365 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 HSF1Q00613 529 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 GPR50Q13585 617 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 OR1C1Q15619 314 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 ZNF791Q3KP31 576 aaPredicted RBP5.03□□□□□ -1.6
CHD2-227ENST00000637572 TBPL2Q6SJ96 375 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.03□□□□□ -1.6
CHD2-227ENST00000637572 GALNT16Q8N428 558 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 SLC37A3Q8NCC5 494 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 UBASH3BQ8TF42 649 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 NIPSNAP1Q9BPW8 284 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 FUNDC2Q9BWH2 189 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 ABCB9Q9NP78 766 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 MRPL39Q9NYK5 338 aaKnown RBP5.03□□□□□ -1.6
CHD2-227ENST00000637572 GMPR2Q9P2T1 348 aaKnown RBP5.03□□□□□ -1.6
CHD2-227ENST00000637572 PLEKHA6Q9Y2H5 1048 aa5.03□□□□□ -1.6
CHD2-227ENST00000637572 TMEM129A0AVI4 362 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 ANKRD30BLA7E2S9 258 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 M0R082 166 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 DNPH1O43598 174 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 SSNA1O43805 119 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 TMEM127O75204 238 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 LIPCP11150 499 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 CD79AP11912 226 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 PAX7P23759 505 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 GLP1RP43220 463 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 SOX2P48431 317 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 LSSP48449 732 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 EMDP50402 254 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 SLC37A1P57057 533 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 GNG2P59768 71 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 CHAF1BQ13112 559 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 CRMP1Q14194 572 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 RAB11BQ15907 218 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 VASNQ6EMK4 673 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 ZNF627Q7L945 461 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 IGFN1Q86VF2 1251 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 TOMM5Q8N4H5 51 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 CNEP1R1Q8N9A8 125 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 EXD3Q8N9H8 876 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 OR2V1Q8NHB1 315 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 TCEAL3Q969E4 200 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 TMEM41AQ96HV5 264 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 ZFP3Q96NJ6 502 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 CLCC1Q96S66 551 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 ISYNA1Q9NPH2 558 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 COQ3Q9NZJ6 369 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 ING4Q9UNL4 249 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 ZNF281Q9Y2X9 895 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 TMEM269A0A1B0GVZ9 245 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 ISPDA4D126 451 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 ANKRD34BA5PLL1 514 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 FTH1P19P0C7X4 201 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 UBCP0CG48 685 aaKnown RBP5.02□□□□□ -1.61
CHD2-227ENST00000637572 CCL4P13236 92 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 RAB3AP20336 220 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 CSRP1P21291 193 aaKnown RBP5.02□□□□□ -1.61
CHD2-227ENST00000637572 CNR1P21554 472 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 ADH7P40394 386 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 NBL1P41271 181 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 BDH1Q02338 343 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 HNRNPA0Q13151 305 aaKnown RBP5.02□□□□□ -1.61
CHD2-227ENST00000637572 CAMK2DQ13557 499 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 GPR176Q14439 515 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 SMCO1Q147U7 214 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 CCDC58Q4VC31 144 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 TIGD3Q6B0B8 471 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 PYHIN1Q6K0P9 492 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 LANCL3Q6ZV70 420 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 EGFL6Q8IUX8 553 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 GLB1L2Q8IW92 636 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 ENTHD1Q8IYW4 607 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 LNX2Q8N448 690 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 OR6S1Q8NH40 331 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 APOBEC4Q8WW27 367 aaKnown RBP5.02□□□□□ -1.61
CHD2-227ENST00000637572 AKAP1Q92667 903 aaKnown RBP eCLIP5.02□□□□□ -1.61
CHD2-227ENST00000637572 FAM46BQ96A09 425 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 SLCO4A1Q96BD0 722 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 C7orf34Q96L11 122 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 NEDD4LQ96PU5 975 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 KRTAP3-3Q9BYR6 98 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 KRTAP3-2Q9BYR7 98 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 LIN28AQ9H9Z2 209 aaKnown RBP5.02□□□□□ -1.61
CHD2-227ENST00000637572 ELOVL3Q9HB03 270 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 OSGIN1Q9UJX0 560 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 C1QTNF9BB2RNN3 333 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 ARPC3O15145 178 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 RAD51DO75771 328 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 IL1AP01583 271 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 C1QTNF9P0C862 333 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 NAT2P11245 290 aa5.02□□□□□ -1.61
CHD2-227ENST00000637572 PRKACBP22694 351 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms