RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	ATP5A1	P25705	553 aa	Known RBP	4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	CAPG	P40121	348 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	GNPDA1	P46926	289 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	NDUFV3	P56181	108 aa	Known RBP	4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	RGS1	Q08116	209 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	RIPPLY1	Q0D2K3	151 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	EIF4EBP2	Q13542	120 aa	Predicted RBP	4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	CUL2	Q13617	745 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	CHI3L2	Q15782	390 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	ZSCAN26	Q16670	478 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	HNRNPA1L2	Q32P51	320 aa	Known RBP	4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	VWA2	Q5GFL6	755 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	MS4A13	Q5J8X5	152 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	ACER2	Q5QJU3	275 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	ADAMTSL5	Q6ZMM2	481 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	TMUB2	Q71RG4	321 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	KIAA1328	Q86T90	577 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	MOB3B	Q86TA1	216 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	CCDC50	Q8IVM0	306 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	SLC22A18AS	Q8N1D0	253 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	FNDC8	Q8TC99	324 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	ZNF396	Q96N95	335 aa	Predicted RBP	4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	AMDHD1	Q96NU7	426 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	RPRD1A	Q96P16	312 aa	Predicted RBP	4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	AGAP3	Q96P47	875 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	PSMB7	Q99436	277 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	NPAS2	Q99743	824 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	TTYH2	Q9BSA4	534 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	TRIM4	Q9C037	500 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	FAM107B	Q9H098	131 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	CYP3A43	Q9HB55	503 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	SGK2	Q9HBY8	427 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	AMBN	Q9NP70	447 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	UTP6	Q9NYH9	597 aa	Known RBP	4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	NUDT4	Q9NZJ9	180 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	MLX	Q9UH92	298 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	PCSK1N	Q9UHG2	260 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	OR51B4	Q9Y5P0	310 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	TRPM6	Q9BX84	2022 aa		4.55	□□□□□ -1.68
NRXN1-223	ENST00000625891	CHD5	Q8TDI0	1954 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	HECTD1	Q9ULT8	2610 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	IGHV3OR16-10	A0A075B7F0	116 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891		A0A0D9SEW6	157 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	OR6C65	A6NJZ3	312 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891		M0QYV0	167 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	KIF2A	O00139	706 aa	Predicted RBP	4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	SLC31A1	O15431	190 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	ATP8B1	O43520	1251 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	LRAT	O95237	230 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	LDOC1	O95751	146 aa	Predicted RBP	4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	IGLV3-25	P01717	112 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	SDC1	P18827	310 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	XRCC1	P18887	633 aa	Predicted RBP	4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	CMA1	P23946	247 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	GTF2H1	P32780	548 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	TAGLN2	P37802	199 aa	Known RBP	4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	STX17	P56962	302 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	SNRPF	P62306	86 aa	Known RBP	4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	OTUD4	Q01804	1114 aa	Known RBP	4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	PLOD1	Q02809	727 aa	Predicted RBP	4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	CNPY1	Q3B7I2	92 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	PHYHD1	Q5SRE7	291 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	PIP5KL1	Q5T9C9	394 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	OR8G2P	Q6IF36	304 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	STXBP4	Q6ZWJ1	553 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	APTX	Q7Z2E3	356 aa	Known RBP	4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	TRPM8	Q7Z2W7	1104 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	LRRC49	Q8IUZ0	686 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	PHC2	Q8IXK0	858 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	UBE2J2	Q8N2K1	259 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	DHRSX	Q8N5I4	330 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	C15orf54	Q8N8G6	183 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891		Q8N9G6	341 aa	Predicted RBP	4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	FBXL13	Q8NEE6	735 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	RPL3L	Q92901	407 aa	Known RBP	4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	FAM131C	Q96AQ9	280 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	SERAC1	Q96JX3	654 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	BMF	Q96LC9	184 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	C9orf85	Q96MD7	179 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	TRIM51	Q9BSJ1	452 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	TRIM15	Q9C019	465 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	COQ4	Q9Y3A0	265 aa		4.54	□□□□□ -1.68
NRXN1-223	ENST00000625891	PCNX3	Q9H6A9	2034 aa		4.53	□□□□□ -1.68
NRXN1-223	ENST00000625891	HELT	A6NFD8	242 aa		4.53	□□□□□ -1.68
NRXN1-223	ENST00000625891	FOXI3	A8MTJ6	420 aa	Predicted RBP	4.53	□□□□□ -1.68
NRXN1-223	ENST00000625891	LAT	O43561	262 aa		4.53	□□□□□ -1.68
NRXN1-223	ENST00000625891	CALU	O43852	315 aa	Predicted RBP	4.53	□□□□□ -1.68
NRXN1-223	ENST00000625891	FCMR	O60667	390 aa		4.53	□□□□□ -1.68
NRXN1-223	ENST00000625891	SMC2	O95347	1197 aa		4.53	□□□□□ -1.68
NRXN1-223	ENST00000625891	CD160	O95971	181 aa		4.53	□□□□□ -1.68
NRXN1-223	ENST00000625891	PNMT	P11086	282 aa		4.53	□□□□□ -1.68
NRXN1-223	ENST00000625891	SLC2A3	P11169	496 aa		4.53	□□□□□ -1.68
NRXN1-223	ENST00000625891	POLR2E	P19388	210 aa	Known RBP	4.53	□□□□□ -1.68
NRXN1-223	ENST00000625891	IGFBP5	P24593	272 aa		4.53	□□□□□ -1.68
NRXN1-223	ENST00000625891	LAP3	P28838	519 aa		4.53	□□□□□ -1.68
NRXN1-223	ENST00000625891	OXTR	P30559	389 aa		4.53	□□□□□ -1.68
NRXN1-223	ENST00000625891	SYK	P43405	635 aa		4.53	□□□□□ -1.68
NRXN1-223	ENST00000625891	RPL34	P49207	117 aa	Known RBP	4.53	□□□□□ -1.68
NRXN1-223	ENST00000625891	ARHGDIA	P52565	204 aa		4.53	□□□□□ -1.68
NRXN1-223	ENST00000625891	CDH4	P55283	916 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms