RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 RHOXF2Q9BQY4 288 aa4.13□□□□□ -1.75
LINC00458-206ENST00000607494 C19orf24Q9BVV8 132 aa4.13□□□□□ -1.75
LINC00458-206ENST00000607494 IL22Q9GZX6 179 aa4.13□□□□□ -1.75
LINC00458-206ENST00000607494 STMN4Q9H169 189 aaPredicted RBP4.13□□□□□ -1.75
LINC00458-206ENST00000607494 RNF167Q9H6Y7 350 aa4.13□□□□□ -1.75
LINC00458-206ENST00000607494 ADAP2Q9NPF8 381 aa4.13□□□□□ -1.75
LINC00458-206ENST00000607494 PXMP2Q9NR77 195 aa4.13□□□□□ -1.75
LINC00458-206ENST00000607494 KLHL21Q9UJP4 597 aa4.13□□□□□ -1.75
LINC00458-206ENST00000607494 YEATS2Q9ULM3 1422 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 GOLGA3Q08378 1498 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 TTC37Q6PGP7 1564 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 IGLV8-61A0A075B6I0 122 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 PES1O00541 588 aaKnown RBP4.12□□□□□ -1.75
LINC00458-206ENST00000607494 NEMFO60524 1076 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 SRSF10O75494 262 aaKnown RBP4.12□□□□□ -1.75
LINC00458-206ENST00000607494 LYPLA1O75608 230 aaPredicted RBP4.12□□□□□ -1.75
LINC00458-206ENST00000607494 FLOT1O75955 427 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 FGFR1OPO95684 399 aaKnown RBP4.12□□□□□ -1.75
LINC00458-206ENST00000607494 CSTAP01040 98 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 FGGP02679 453 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 FOLR2P14207 255 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 KLK7P49862 253 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 YWHAGP61981 247 aaKnown RBP eCLIP4.12□□□□□ -1.75
LINC00458-206ENST00000607494 PAGE2BQ5JRK9 111 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 SOHLH1Q5JUK2 328 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 PPM1LQ5SGD2 360 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 OR52W1Q6IF63 320 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 C1orf94Q6P1W5 598 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 ZNF571Q7Z3V5 609 aaPredicted RBP4.12□□□□□ -1.75
LINC00458-206ENST00000607494 CDC20BQ86Y33 519 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 SMARCD2Q92925 531 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 KCTD14Q9BQ13 255 aaPredicted RBP4.12□□□□□ -1.75
LINC00458-206ENST00000607494 SIKE1Q9BRV8 207 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 Q9H3A6 140 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 TREM2Q9NZC2 230 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 KCNIP1Q9NZI2 227 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 UXTQ9UBK9 157 aaPredicted RBP4.12□□□□□ -1.75
LINC00458-206ENST00000607494 APOBEC3BQ9UH17 382 aaKnown RBP4.12□□□□□ -1.75
LINC00458-206ENST00000607494 KIF25Q9UIL4 384 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 CSAG2Q9Y5P2 127 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 POGZQ7Z3K3 1410 aa4.12□□□□□ -1.75
LINC00458-206ENST00000607494 TDRD15B5MCY1 1934 aaKnown RBP4.11□□□□□ -1.75
LINC00458-206ENST00000607494 NOTCH2Q04721 2471 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 PREX1Q8TCU6 1659 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 A6NIZ1 184 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 CHMP2AO43633 222 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 MGRN1O60291 552 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 SNAI1O95863 264 aaPredicted RBP4.11□□□□□ -1.75
LINC00458-206ENST00000607494 SEMG1P04279 462 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 SERPINE2P07093 398 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 UBCP0CG48 685 aaKnown RBP4.11□□□□□ -1.75
LINC00458-206ENST00000607494 CAPN2P17655 700 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 CXCR2P25025 360 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 GDF1P27539 372 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 RAP1BP61224 184 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 RAD51Q06609 339 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 KRTAP13-3Q3SY46 172 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 STUMQ69YW2 141 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 PRSS41Q7RTY9 318 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 ZNF546Q86UE3 836 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 C6orf223Q8N319 242 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 EID2Q8N6I1 236 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 ZNF557Q8N988 423 aaPredicted RBP4.11□□□□□ -1.75
LINC00458-206ENST00000607494 C8orf31Q8N9H6 132 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 OR10G3Q8NGC4 313 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 OR9A1PQ8NGU1 263 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 MITD1Q8WV92 249 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 SLC25A38Q96DW6 304 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 XPO6Q96QU8 1125 aaKnown RBP4.11□□□□□ -1.75
LINC00458-206ENST00000607494 TMEM246Q9BRR3 403 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 C20orf85Q9H1P6 137 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 HAUS4Q9H6D7 363 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 CWH43Q9H720 699 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 MRPL47Q9HD33 250 aaKnown RBP4.11□□□□□ -1.75
LINC00458-206ENST00000607494 LZTFL1Q9NQ48 299 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 TRAF3IP3Q9Y228 551 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 UGT2A1Q9Y4X1 527 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 MROH7-TTC4A0A0A0MT08 1334 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 FHOD3Q2V2M9 1422 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 AKNAQ7Z591 1439 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 DENND4BO75064 1496 aaPredicted RBP4.11□□□□□ -1.75
LINC00458-206ENST00000607494 ZMYM4Q5VZL5 1548 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 ZFYVE16Q7Z3T8 1539 aa4.11□□□□□ -1.75
LINC00458-206ENST00000607494 LTBP4Q8N2S1 1624 aa4.1□□□□□ -1.75
LINC00458-206ENST00000607494 IGHV3OR16-13A0A075B7E8 117 aa4.1□□□□□ -1.75
LINC00458-206ENST00000607494 A0A0J9YYE9 177 aa4.1□□□□□ -1.75
LINC00458-206ENST00000607494 M0QX08 132 aa4.1□□□□□ -1.75
LINC00458-206ENST00000607494 NDUFS8O00217 210 aa4.1□□□□□ -1.75
LINC00458-206ENST00000607494 TRBC1P01850 177 aa4.1□□□□□ -1.75
LINC00458-206ENST00000607494 CCDC166P0CW27 439 aa4.1□□□□□ -1.75
LINC00458-206ENST00000607494 TCN1P20061 433 aaPredicted RBP4.1□□□□□ -1.75
LINC00458-206ENST00000607494 RORAP35398 523 aa4.1□□□□□ -1.75
LINC00458-206ENST00000607494 MDH2P40926 338 aaKnown RBP4.1□□□□□ -1.75
LINC00458-206ENST00000607494 SLC1A2P43004 574 aa4.1□□□□□ -1.75
LINC00458-206ENST00000607494 RGRP47804 291 aa4.1□□□□□ -1.75
LINC00458-206ENST00000607494 ARRB1P49407 418 aaPredicted RBP4.1□□□□□ -1.75
LINC00458-206ENST00000607494 SSR4P51571 173 aa4.1□□□□□ -1.75
LINC00458-206ENST00000607494 CLDN18P56856 261 aa4.1□□□□□ -1.75
LINC00458-206ENST00000607494 KRTAP10-8P60410 259 aa4.1□□□□□ -1.75
LINC00458-206ENST00000607494 FBXO48Q5FWF7 155 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms