RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 SLC16A12Q6ZSM3 486 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 PM20D2Q8IYS1 436 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 OR6V1Q8N148 313 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 OR10H4Q8NGA5 316 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 OR6K6Q8NGW6 343 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 TSSK2Q96PF2 358 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 SYT4Q9H2B2 425 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 QPCTLQ9NXS2 382 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 CAB39Q9Y376 341 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 FKBP7Q9Y680 259 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 OR2T7P0C7T2 308 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 TNFSF10P50591 281 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 GALEQ14376 348 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 OR2G6Q5TZ20 316 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 TMPRSS11AQ6ZMR5 421 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 ESPNLQ6ZVH7 1005 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 TMEM251Q8N6I4 163 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 ZFP62Q8NB50 900 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 OR2T27Q8NH04 317 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 SNIP1Q8TAD8 396 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 ZHX1-C8orf76Q96EF9 292 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 OPALINQ96PE5 141 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 MSRB2Q9Y3D2 182 aa15.8■□□□□ 0.12
SHKBP1-224ENST00000600718 SLC22A23A1A5C7 686 aa15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 BOLA2-SMG1P6H3BVE0 249 aa15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 GABARAPO95166 117 aa15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 VAMP5O95183 116 aa15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 INHBBP09529 407 aa15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 RFC3P40938 356 aa15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 CENPAP49450 140 aa15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 AGFG1P52594 562 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 RAC3P60763 192 aa15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 TSTQ16762 297 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 ASB18Q6ZVZ8 466 aa15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 ZBTB46Q86UZ6 589 aa15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 ZNF485Q8NCK3 441 aa15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 GATAD2BQ8WXI9 593 aa15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 TXNDC15Q96J42 360 aa15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 ARHGAP9Q9BRR9 750 aa15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 NUAK2Q9H093 628 aa15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 B9D1Q9UPM9 204 aa15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 MED13Q9UHV7 2174 aa15.79■□□□□ 0.12
SHKBP1-224ENST00000600718 FAM171A2A8MVW0 826 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 ZNF814B7Z6K7 855 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 DCTN6O00399 190 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 CCRL2O00421 344 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 TNFSF11O14788 317 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 ATE1O95260 518 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 POU3F2P20265 443 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 BLVRAP53004 296 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 PPIAP62937 165 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 DOC2BQ14184 412 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 HDDC2Q7Z4H3 204 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 GGNQ86UU5 652 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 SLC22A16Q86VW1 577 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 TBC1D15Q8TC07 691 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 TBX5Q99593 518 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 DCUN1D5Q9BTE7 237 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 ALG8Q9BVK2 526 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 MFRPQ9BY79 579 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 TSPAN10Q9H1Z9 355 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 PTPRZ1P23471 2315 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 FAM166BA8MTA8 275 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 ZNF43P17038 809 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 CRABP1P29762 137 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 MAGEA5P43359 124 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 BIDP55957 195 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 CLDN20P56880 219 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 CARD18P57730 90 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 RUNX1T1Q06455 604 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 ACSM1Q08AH1 577 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 CTF1Q16619 201 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 HBMQ6B0K9 141 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 C19orf48Q6RUI8 117 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 ZNF322Q6U7Q0 402 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 DCDC5Q6ZRR9 648 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 GPAT4Q86UL3 456 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 SLC35F2Q8IXU6 374 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 ITPKCQ96DU7 683 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 KCNK17Q96T54 332 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 MED29Q9NX70 200 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 ITGB1BP2Q9UKP3 347 aa15.78■□□□□ 0.12
SHKBP1-224ENST00000600718 A0A1W2PQL4 384 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-224ENST00000600718 EIF1AYO14602 144 aaKnown RBP15.77■□□□□ 0.12
SHKBP1-224ENST00000600718 TFP02787 698 aa15.77■□□□□ 0.12
SHKBP1-224ENST00000600718 ZNF85Q03923 595 aa15.77■□□□□ 0.12
SHKBP1-224ENST00000600718 MOGQ16653 247 aa15.77■□□□□ 0.12
SHKBP1-224ENST00000600718 PDSS1Q5T2R2 415 aa15.77■□□□□ 0.12
SHKBP1-224ENST00000600718 NCCRP1Q6ZVX7 275 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-224ENST00000600718 SLC16A9Q7RTY1 509 aa15.77■□□□□ 0.12
SHKBP1-224ENST00000600718 OR2V1Q8NHB1 315 aa15.77■□□□□ 0.12
SHKBP1-224ENST00000600718 SPRYD4Q8WW59 207 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-224ENST00000600718 SMAD5Q99717 465 aaKnown RBP15.77■□□□□ 0.12
SHKBP1-224ENST00000600718 SSUH2Q9Y2M2 353 aa15.77■□□□□ 0.12
SHKBP1-224ENST00000600718 CEP250Q9BV73 2442 aa15.77■□□□□ 0.12
SHKBP1-224ENST00000600718 FUOMA2VDF0 154 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 TRAF3IP2O43734 574 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 SELENOFO60613 162 aa15.76■□□□□ 0.11
SHKBP1-224ENST00000600718 SLC16A7O60669 478 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms