RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ZNF367Q7RTV3 350 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 POMGNT2Q8NAT1 580 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 OR10D3Q8NH80 312 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 OR5M11Q96RB7 305 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 KCNK17Q96T54 332 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 ZNF649Q9BS31 505 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 ALG12Q9BV10 488 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 IGHV3-15A0A0B4J1V0 119 aa18.56■□□□□ 0.56
PNKP-203ENST00000593946 TMEM129A0AVI4 362 aa18.56■□□□□ 0.56
PNKP-203ENST00000593946 SMAD9O15198 467 aaKnown RBP18.56■□□□□ 0.56
PNKP-203ENST00000593946 ZNF708P17019 499 aa18.56■□□□□ 0.56
PNKP-203ENST00000593946 ZNF43P17038 809 aa18.56■□□□□ 0.56
PNKP-203ENST00000593946 BIDP55957 195 aa18.56■□□□□ 0.56
PNKP-203ENST00000593946 ZBTB46Q86UZ6 589 aa18.56■□□□□ 0.56
PNKP-203ENST00000593946 OR6K6Q8NGW6 343 aa18.56■□□□□ 0.56
PNKP-203ENST00000593946 NEIL3Q8TAT5 605 aa18.56■□□□□ 0.56
PNKP-203ENST00000593946 NUAK2Q9H093 628 aa18.56■□□□□ 0.56
PNKP-203ENST00000593946 SRA1Q9HD15 236 aaKnown RBP18.56■□□□□ 0.56
PNKP-203ENST00000593946 LIPGQ9Y5X9 500 aa18.56■□□□□ 0.56
PNKP-203ENST00000593946 FKBP7Q9Y680 259 aa18.56■□□□□ 0.56
PNKP-203ENST00000593946 MYL12BO14950 172 aa18.55■□□□□ 0.56
PNKP-203ENST00000593946 CXCL13O43927 109 aa18.55■□□□□ 0.56
PNKP-203ENST00000593946 ITGB2P05107 769 aa18.55■□□□□ 0.56
PNKP-203ENST00000593946 MRPL3P09001 348 aaKnown RBP18.55■□□□□ 0.56
PNKP-203ENST00000593946 ENPP1P22413 925 aa18.55■□□□□ 0.56
PNKP-203ENST00000593946 EIF1AXP47813 144 aaKnown RBP18.55■□□□□ 0.56
PNKP-203ENST00000593946 C1DQ13901 141 aaKnown RBP18.55■□□□□ 0.56
PNKP-203ENST00000593946 DOC2BQ14184 412 aa18.55■□□□□ 0.56
PNKP-203ENST00000593946 PDSS1Q5T2R2 415 aa18.55■□□□□ 0.56
PNKP-203ENST00000593946 ACBD7Q8N6N7 88 aa18.55■□□□□ 0.56
PNKP-203ENST00000593946 ABTB1Q969K4 478 aaPredicted RBP18.55■□□□□ 0.56
PNKP-203ENST00000593946 DGCR14Q96DF8 476 aaKnown RBP18.55■□□□□ 0.56
PNKP-203ENST00000593946 COG8Q96MW5 612 aa18.55■□□□□ 0.56
PNKP-203ENST00000593946 CNN2Q99439 309 aaKnown RBP18.55■□□□□ 0.56
PNKP-203ENST00000593946 TSPAN10Q9H1Z9 355 aaPredicted RBP18.55■□□□□ 0.56
PNKP-203ENST00000593946 CHCHD3Q9NX63 227 aaKnown RBP18.55■□□□□ 0.56
PNKP-203ENST00000593946 ERVK13-1Q9NX77 482 aa18.55■□□□□ 0.56
PNKP-203ENST00000593946 NCOR2Q9Y618 2525 aa18.55■□□□□ 0.56
PNKP-203ENST00000593946 C12orf71A8MTZ7 269 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 AHCYL1O43865 530 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 TRMUO75648 421 aaKnown RBP18.54■□□□□ 0.56
PNKP-203ENST00000593946 ACTL6AO96019 429 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 PDGFAP04085 211 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 SLC17A1Q14916 467 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 ZNF169Q14929 603 aaPredicted RBP18.54■□□□□ 0.56
PNKP-203ENST00000593946 MED22Q15528 200 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 BCL2A1Q16548 175 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 TIGD6Q17RP2 521 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 HDDC2Q7Z4H3 204 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 LHFPL3Q86UP9 236 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 CPNE4Q96A23 557 aaPredicted RBP18.54■□□□□ 0.56
PNKP-203ENST00000593946 EMC6Q9BV81 110 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 MRPL13Q9BYD1 178 aaKnown RBP18.54■□□□□ 0.56
PNKP-203ENST00000593946 DEFB127Q9H1M4 99 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 TIGARQ9NQ88 270 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 INPP5EQ9NRR6 644 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 KLHL13Q9P2N7 655 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 BOD1L1Q8NFC6 3051 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 FAM171A2A8MVW0 826 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 MKRN2OSH3BPM6 223 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 ZNF24P17028 368 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 SPHARQ15513 63 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 LYPD4Q6UWN0 246 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 CLVS1Q8IUQ0 354 aaPredicted RBP18.54■□□□□ 0.56
PNKP-203ENST00000593946 OR6X1Q8NH79 312 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 SF3B5Q9BWJ5 86 aaKnown RBP18.54■□□□□ 0.56
PNKP-203ENST00000593946 B9D1Q9UPM9 204 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 PCDHGB7Q9Y5F8 929 aa18.54■□□□□ 0.56
PNKP-203ENST00000593946 IGLV1-36A0A0B4J1U3 117 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 TRGV5A0A0B4J1U4 118 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 TFECO14948 347 aaPredicted RBP18.53■□□□□ 0.56
PNKP-203ENST00000593946 TFP02787 698 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 CTLA4P16410 223 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 WNT4P56705 351 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 ACTC1P68032 377 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 ACTA1P68133 377 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 GPR107Q5VW38 600 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 VASNQ6EMK4 673 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 ABLIM2Q6H8Q1 611 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 Q6ZS92 163 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 CREB3L2Q70SY1 520 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 SYT14Q8NB59 555 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 ZNF485Q8NCK3 441 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 OR9K2Q8NGE7 335 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 FAM122AQ96E09 287 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 SLC25A44Q96H78 314 aaPredicted RBP18.53■□□□□ 0.56
PNKP-203ENST00000593946 MGLLQ99685 303 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 RACGAP1Q9H0H5 632 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 RAXQ9Y2V3 346 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 ATMQ13315 3056 aa18.53■□□□□ 0.56
PNKP-203ENST00000593946 SLC35F4A4IF30 521 aa18.52■□□□□ 0.56
PNKP-203ENST00000593946 CCDC160A6NGH7 325 aa18.52■□□□□ 0.56
PNKP-203ENST00000593946 SELENOFO60613 162 aa18.52■□□□□ 0.56
PNKP-203ENST00000593946 SLC16A7O60669 478 aa18.52■□□□□ 0.56
PNKP-203ENST00000593946 IGHG3P01860 377 aa18.52■□□□□ 0.56
PNKP-203ENST00000593946 PGA4P0DJD7 388 aa18.52■□□□□ 0.56
PNKP-203ENST00000593946 PGA3P0DJD8 388 aa18.52■□□□□ 0.56
PNKP-203ENST00000593946 CRABP1P29762 137 aa18.52■□□□□ 0.56
PNKP-203ENST00000593946 NAA10P41227 235 aaPredicted RBP18.52■□□□□ 0.56
PNKP-203ENST00000593946 UCNP55089 124 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms