RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 ZNF426Q9BUY5 554 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 DENND2DQ9H6A0 471 aaPredicted RBP13.73□□□□□ -0.21
CRLF3-203ENST00000578692 GLTPQ9NZD2 209 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 ZNF229Q9UJW7 825 aa13.73□□□□□ -0.21
CRLF3-203ENST00000578692 VIMP08670 466 aaKnown RBP13.72□□□□□ -0.21
CRLF3-203ENST00000578692 ASAH2BP0C7U1 165 aa13.72□□□□□ -0.21
CRLF3-203ENST00000578692 UMPSP11172 480 aa13.72□□□□□ -0.21
CRLF3-203ENST00000578692 ZNF14P17017 642 aaPredicted RBP13.72□□□□□ -0.21
CRLF3-203ENST00000578692 PTDSS1P48651 473 aaKnown RBP13.72□□□□□ -0.21
CRLF3-203ENST00000578692 SF3A3Q12874 501 aaKnown RBP eCLIP13.72□□□□□ -0.21
CRLF3-203ENST00000578692 KLF10Q13118 480 aa13.72□□□□□ -0.21
CRLF3-203ENST00000578692 COQ5Q5HYK3 327 aa13.72□□□□□ -0.21
CRLF3-203ENST00000578692 CARM1Q86X55 608 aa13.72□□□□□ -0.21
CRLF3-203ENST00000578692 ZCCHC24Q8N2G6 241 aaKnown RBP13.72□□□□□ -0.21
CRLF3-203ENST00000578692 ZNF540Q8NDQ6 660 aa13.72□□□□□ -0.21
CRLF3-203ENST00000578692 NEU4Q8WWR8 484 aaPredicted RBP13.72□□□□□ -0.21
CRLF3-203ENST00000578692 ZNF566Q969W8 418 aa13.72□□□□□ -0.21
CRLF3-203ENST00000578692 SLC25A44Q96H78 314 aaPredicted RBP13.72□□□□□ -0.21
CRLF3-203ENST00000578692 TMEM160Q9NX00 188 aa13.72□□□□□ -0.21
CRLF3-203ENST00000578692 ZNF224Q9NZL3 707 aa13.72□□□□□ -0.21
CRLF3-203ENST00000578692 BAG5Q9UL15 447 aa13.72□□□□□ -0.21
CRLF3-203ENST00000578692 CMAHPQ9Y471 501 aa13.72□□□□□ -0.21
CRLF3-203ENST00000578692 SPEF1Q9Y4P9 236 aa13.72□□□□□ -0.21
CRLF3-203ENST00000578692 LOC100653049A0A140TA62 436 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 BBIP1A8MTZ0 92 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 BLOC1S5-TXNDC5H3BN57 136 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 FXYD1O00168 92 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 MRASO14807 208 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 KRT34O76011 436 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 UBL3O95164 117 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 RAB36O95755 333 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 BCL10O95999 233 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 ERCC1P07992 297 aaPredicted RBP13.71□□□□□ -0.21
CRLF3-203ENST00000578692 ZNF35P13682 527 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 GIPRP48546 466 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 GZMKP49863 264 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 MELKQ14680 651 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 MAPRE2Q15555 327 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 IQCCQ4KMZ1 466 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 REP15Q6BDI9 236 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 ERICH5Q6P6B1 374 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 LRFN4Q6PJG9 635 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 CXXC5Q7LFL8 322 aaKnown RBP13.71□□□□□ -0.21
CRLF3-203ENST00000578692 SKA3Q8IX90 412 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 ZNF583Q96ND8 569 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 MEPEQ9NQ76 525 aaPredicted RBP13.71□□□□□ -0.21
CRLF3-203ENST00000578692 SAR1AQ9NR31 198 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 FGFR1OP2Q9NVK5 253 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 CDC42EP3Q9UKI2 254 aa13.71□□□□□ -0.21
CRLF3-203ENST00000578692 LMX1BO60663 402 aa13.71□□□□□ -0.22
CRLF3-203ENST00000578692 STAMBPO95630 424 aa13.71□□□□□ -0.22
CRLF3-203ENST00000578692 MT-ND1P03886 318 aa13.71□□□□□ -0.22
CRLF3-203ENST00000578692 TNFRSF1BP20333 461 aa13.71□□□□□ -0.22
CRLF3-203ENST00000578692 NANOGNBQ7Z5D8 188 aa13.71□□□□□ -0.22
CRLF3-203ENST00000578692 NKAIN4Q8IVV8 208 aa13.71□□□□□ -0.22
CRLF3-203ENST00000578692 SLC22A24Q8N4F4 322 aa13.71□□□□□ -0.22
CRLF3-203ENST00000578692 PCYOX1LQ8NBM8 494 aa13.71□□□□□ -0.22
CRLF3-203ENST00000578692 C10orf82Q8WW14 230 aa13.71□□□□□ -0.22
CRLF3-203ENST00000578692 BEX2Q9BXY8 128 aa13.71□□□□□ -0.22
CRLF3-203ENST00000578692 DYNLRB1Q9NP97 96 aa13.71□□□□□ -0.22
CRLF3-203ENST00000578692 GID8Q9NWU2 228 aa13.71□□□□□ -0.22
CRLF3-203ENST00000578692 RIMS3Q9UJD0 308 aa13.71□□□□□ -0.22
CRLF3-203ENST00000578692 FBXL3Q9UKT7 428 aa13.71□□□□□ -0.22
CRLF3-203ENST00000578692 SONP18583 2426 aaKnown RBP13.7□□□□□ -0.22
CRLF3-203ENST00000578692 IGHV4-61A0A0C4DH41 118 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 DHHO43323 396 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 ENTPD5O75356 428 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 IFNA14P01570 189 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 ADRA2AP08913 450 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 QDPRP09417 244 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 PATE4P0C8F1 98 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 FAM157CP0CG43 387 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 PGA4P0DJD7 388 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 PGA3P0DJD8 388 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 OR8G3PP0DMU2 310 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 APEHP13798 732 aaKnown RBP13.7□□□□□ -0.22
CRLF3-203ENST00000578692 DAOP14920 347 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 ZNF16P17020 682 aaPredicted RBP13.7□□□□□ -0.22
CRLF3-203ENST00000578692 FUT1P19526 365 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 GLRXP35754 106 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 EVX1P49640 407 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 TAS2R41P59536 307 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 GALK2Q01415 458 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 PIN1Q13526 163 aaPredicted RBP13.7□□□□□ -0.22
CRLF3-203ENST00000578692 RAB39AQ14964 217 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 CGB2Q6NT52 195 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 DEF8Q6ZN54 512 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 CDK20Q8IZL9 346 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 SPATA3Q8NHX4 192 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 FGFBP3Q8TAT2 258 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 MRPL24Q96A35 216 aaKnown RBP13.7□□□□□ -0.22
CRLF3-203ENST00000578692 BPESC1Q9GZL8 116 aa13.7□□□□□ -0.22
CRLF3-203ENST00000578692 POLR2J2Q9GZM3 115 aaKnown RBP13.7□□□□□ -0.22
CRLF3-203ENST00000578692 POLR2J3Q9H1A7 115 aaKnown RBP13.7□□□□□ -0.22
CRLF3-203ENST00000578692 SHOX2O60902 331 aaPredicted RBP13.69□□□□□ -0.22
CRLF3-203ENST00000578692 OR5F1O95221 314 aa13.69□□□□□ -0.22
CRLF3-203ENST00000578692 FARS2O95363 451 aaKnown RBP13.69□□□□□ -0.22
CRLF3-203ENST00000578692 SERPINA5P05154 406 aa13.69□□□□□ -0.22
CRLF3-203ENST00000578692 F13BP05160 661 aa13.69□□□□□ -0.22
CRLF3-203ENST00000578692 IGFBP1P08833 259 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms