RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 CLDN16Q9Y5I7 305 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 CROCC2H7BZ55 1655 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 RIMS1Q86UR5 1692 aaKnown RBP8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 LRP5LA4QPB2 252 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 FAM170BA6NMN3 283 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 CHRM4P08173 479 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 MAPTP10636 758 aaKnown RBP8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 SLC6A12P48065 614 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 ASPHD2Q6ICH7 369 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF676Q8N7Q3 588 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 IP6K3Q96PC2 410 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 CACNA1FO60840 1977 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 MAP3K4Q9Y6R4 1608 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 TRAV18A0A075B6X5 111 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 KNG1P01042 644 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 CCNOP22674 350 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 PTGER1P34995 402 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 PSMB10P40306 273 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 GPR4P46093 362 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 CDKN1BP46527 198 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 OR3A2P47893 321 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 LHX1P48742 406 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 TMEM267Q0VDI3 215 aaPredicted RBP8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 NFATC2Q13469 925 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 TMEM123Q8N131 208 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 GLI2P10070 1586 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF878C9JN71 531 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF354AO60765 605 aaPredicted RBP8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 RPP40O75818 363 aaKnown RBP8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 SULT1A3P0DMM9 295 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 SULT1A4P0DMN0 295 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 PTHLHP12272 177 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 IRF2P14316 349 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 TGFBR3Q03167 851 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 LAMTOR4Q0VGL1 99 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 YOD1Q5VVQ6 348 aaPredicted RBP8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 CPZQ66K79 652 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 IL34Q6ZMJ4 242 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 SIGLECL1Q8N7X8 197 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 APH1BQ8WW43 257 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 PINX1Q96BK5 328 aaKnown RBP8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 OSMRQ99650 979 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 G6PC2Q9NQR9 355 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 MTCH1Q9NZJ7 389 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 B3GALT1Q9Y5Z6 326 aa8.31□□□□□ -1.08
GTF2A1-203ENST00000553612 NAP1L6A6NFF2 107 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 RIIAD1A6NNX1 92 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 OR2F2O95006 317 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 UTS2O95399 124 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 LIPFP07098 398 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 C8orf89P0DMQ9 161 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 DPEP1P16444 411 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 DRD1P21728 446 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 ERVS71-1P61550 626 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 OR2F1Q13607 317 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 NFIXQ14938 502 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 ZPBP2Q6X784 338 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 TMEM234Q8WY98 164 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 NRIP2Q9BQI9 281 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 RTP3Q9BQQ7 232 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 TRMT61BQ9BVS5 477 aaKnown RBP8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 TMEM121BQ9BXQ6 578 aaPredicted RBP8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 HDAC8Q9BY41 377 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 ZMAT3Q9HA38 289 aaKnown RBP8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 CCNL1Q9UK58 526 aaPredicted RBP8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 TMPRSS11DO60235 418 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 PMCHP20382 165 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 AK4P27144 223 aaPredicted RBP8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 OTX2P32243 289 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 SOX18P35713 384 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 ARFRP1Q13795 201 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 MIDNQ504T8 468 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 ACSM3Q53FZ2 586 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 ABI3Q9P2A4 366 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 FBXW2Q9UKT8 454 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 DIP2CQ9Y2E4 1556 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 GAGE10A6NGK3 116 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 CYB5AP00167 134 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 GNB3P16520 340 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 SNRPFP62306 86 aaKnown RBP8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 MICBQ29980 383 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 DCAF10Q5QP82 559 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF343Q6P1L6 599 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 TMEM184AQ6ZMB5 413 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 RTN4RL2Q86UN3 420 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 NIT1Q86X76 327 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 RNF175Q8N4F7 328 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 OR2AK2Q8NG84 335 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 OR5M3Q8NGP4 307 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 OR9A4Q8NGU2 314 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 WNT8BQ93098 351 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 MR1Q95460 341 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 ERGIC1Q969X5 290 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 SHDQ96IW2 340 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 NRSN2Q9GZP1 204 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 LPAR5Q9H1C0 372 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 PCED1AQ9H1Q7 454 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 TMEM27Q9HBJ8 222 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 HRASLSQ9HDD0 168 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 KLHL13Q9P2N7 655 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms