RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ANKDD1AQ495B1 522 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 FAM69AQ5T7M9 428 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 C1orf140Q5VVS0 124 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 PODNL1Q6PEZ8 512 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 TTC33Q6PID6 262 aaPredicted RBP5.12□□□□□ -1.59
SCAF11-213ENST00000550629 ZNF730Q6ZMV8 503 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 CHERPQ8IWX8 916 aaKnown RBP5.12□□□□□ -1.59
SCAF11-213ENST00000550629 CDK20Q8IZL9 346 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 SVOPLQ8N434 492 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 SCAIQ8N9R8 606 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 ST6GALNAC3Q8NDV1 305 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 OR4C15Q8NGM1 316 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 OR2V1Q8NHB1 315 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 MFSD8Q8NHS3 518 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 FAM57AQ8TBR7 257 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 SLC7A13Q8TCU3 470 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 ZPLD1Q8TCW7 415 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 TMEM239Q8WW34 195 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 LIPHQ8WWY8 451 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 PYDC1Q8WXC3 89 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 DNAJC9Q8WXX5 260 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 MIB2Q96AX9 1013 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 CENPNQ96H22 339 aaPredicted RBP5.12□□□□□ -1.59
SCAF11-213ENST00000550629 KLHL15Q96M94 604 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 PSD2Q9BQI7 771 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 EXO5Q9H790 373 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 DCLRE1BQ9H816 532 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 C6orf203Q9P0P8 240 aaPredicted RBP5.12□□□□□ -1.59
SCAF11-213ENST00000550629 LUZP4Q9P127 313 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 SPRR3Q9UBC9 169 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 ZNF835Q9Y2P0 537 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 MED31Q9Y3C7 131 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 SAMHD1Q9Y3Z3 626 aaKnown RBP5.12□□□□□ -1.59
SCAF11-213ENST00000550629 ZNF175Q9Y473 711 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 LYVE1Q9Y5Y7 322 aa5.12□□□□□ -1.59
SCAF11-213ENST00000550629 A0A087WUU8 490 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 TRBV4-1A0A0J9YWV2 114 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 A0A1B0GTH9 108 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 LOC102725191A0A1B0GVB3 256 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 TMEM72A0PK05 275 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 CD8B2A6NJW9 211 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 LIPT2A6NK58 231 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 FTCDNL1E5RQL4 147 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 H0YHG0 523 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 H3BML4 177 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 J3KTA2 159 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 SLC19A2O60779 497 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 E2F6O75461 281 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 TIPRLO75663 272 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 DIRAS1O95057 198 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 CCNB2O95067 398 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 VAMP5O95183 116 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 TFPIP10646 304 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 GABRA1P14867 456 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 IL11P20809 199 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 GSTM3P21266 225 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 FPR3P25089 353 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 YAP1P46937 504 aaKnown RBP5.11□□□□□ -1.59
SCAF11-213ENST00000550629 SLC9A3P48764 834 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 DIO1P49895 249 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 AGFG1P52594 562 aaKnown RBP5.11□□□□□ -1.59
SCAF11-213ENST00000550629 CLDN20P56880 219 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 CARD18P57730 90 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 LOXL3P58215 753 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 SLC35A1P78382 337 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 H3F3AP84243 136 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 EGR4Q05215 589 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 PRKCDQ05655 676 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 COX10Q12887 443 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 TAF11Q15544 211 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 ZNF74Q16587 644 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 ZNF239Q16600 458 aaKnown RBP5.11□□□□□ -1.59
SCAF11-213ENST00000550629 MICAQ29983 383 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 CTU2Q2VPK5 515 aaKnown RBP5.11□□□□□ -1.59
SCAF11-213ENST00000550629 TMEM176BQ3YBM2 270 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-213ENST00000550629 SOWAHCQ53LP3 525 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-213ENST00000550629 PRR30Q53SZ7 412 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-213ENST00000550629 FGD3Q5JSP0 725 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 PLAC9Q5JTB6 97 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 DCST1Q5T197 706 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 WLSQ5T9L3 541 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 HBMQ6B0K9 141 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 SFRP4Q6FHJ7 346 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-213ENST00000550629 ZNF770Q6IQ21 691 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-213ENST00000550629 SHQ1Q6PI26 577 aaKnown RBP5.11□□□□□ -1.59
SCAF11-213ENST00000550629 GFRALQ6UXV0 394 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 WDR88Q6ZMY6 472 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 Q6ZPB1 254 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-213ENST00000550629 TMPPEQ6ZT21 453 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 TMPRSS11FQ6ZWK6 438 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 CHMP1BQ7LBR1 199 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 RRM2BQ7LG56 351 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 DTX2Q86UW9 622 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 HIPK1Q86Z02 1210 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 NKAIN4Q8IVV8 208 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 SLC43A2Q8N370 569 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 ADPRHL1Q8NDY3 354 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 OR4K5Q8NGD3 323 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 OR5M1Q8NGP8 315 aa5.11□□□□□ -1.59
SCAF11-213ENST00000550629 PPP1R35Q8TAP8 253 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms