RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 SYNGR3O43761 229 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 RGS9O75916 674 aaPredicted RBP9.88□□□□□ -0.83
RAB5C-203ENST00000546881 RAB36O95755 333 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 HPRP00739 348 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 HOXB9P17482 250 aaPredicted RBP9.88□□□□□ -0.83
RAB5C-203ENST00000546881 AHCYP23526 432 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 PRKAR1BP31321 381 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 GPR6P46095 362 aaPredicted RBP9.88□□□□□ -0.83
RAB5C-203ENST00000546881 DVL1P1P54792 670 aaPredicted RBP9.88□□□□□ -0.83
RAB5C-203ENST00000546881 CDK6Q00534 326 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 PMS2P3Q13401 168 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 CAMK2DQ13557 499 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 SCARB2Q14108 478 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 MAD2L1BPQ15013 274 aaPredicted RBP9.88□□□□□ -0.83
RAB5C-203ENST00000546881 MSMPQ1L6U9 139 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 SHQ1Q6PI26 577 aaKnown RBP9.88□□□□□ -0.83
RAB5C-203ENST00000546881 UGT2A3Q6UWM9 527 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 C5orf46Q6UWT4 87 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 C6orf89Q6UWU4 347 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 THSD4Q6ZMP0 1018 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 NET1Q7Z628 596 aaPredicted RBP9.88□□□□□ -0.83
RAB5C-203ENST00000546881 KRT73Q86Y46 540 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 C20orf196Q8IYI0 205 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 DNAJA4Q8WW22 397 aaPredicted RBP9.88□□□□□ -0.83
RAB5C-203ENST00000546881 SLC35B4Q969S0 331 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 MRPL24Q96A35 216 aaKnown RBP9.88□□□□□ -0.83
RAB5C-203ENST00000546881 LRRC58Q96CX6 371 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 TXNDC15Q96J42 360 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 LRRC37BQ96QE4 947 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 ECSITQ9BQ95 431 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 ULBP2Q9BZM5 246 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 IKZF5Q9H5V7 419 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 C12orf10Q9HB07 376 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 B3GNT2Q9NY97 397 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 DUSP13Q9UII6 198 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 SLC13A4Q9UKG4 626 aa9.88□□□□□ -0.83
RAB5C-203ENST00000546881 A0A1W2PPW3 197 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 LRRN3E7EW58 273 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 MS4A18H0YCH9 400 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 NPPAP01160 153 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 HPXP02790 462 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 ARAFP10398 606 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 SAGP10523 405 aaPredicted RBP9.87□□□□□ -0.83
RAB5C-203ENST00000546881 GPX2P18283 190 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 COL8A2P25067 703 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 AQP1P29972 269 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 GIPRP48546 466 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 NUDT2P50583 147 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 RGS8P57771 180 aaPredicted RBP9.87□□□□□ -0.83
RAB5C-203ENST00000546881 RAB1AP62820 205 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 SELPLGQ14242 412 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 MFSD13AQ14CX5 517 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 MS4A18Q3C1V0 323 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 ALKBH6Q3KRA9 238 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 GLIPR1L2Q4G1C9 344 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 ELFN2Q5R3F8 820 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 NANOGP8Q6NSW7 305 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 REEP3Q6NUK4 255 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 ULK3Q6PHR2 472 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 PIGWQ7Z7B1 504 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 COMTD1Q86VU5 262 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 LRP11Q86VZ4 500 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 CARM1Q86X55 608 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 MEX3DQ86XN8 651 aaKnown RBP9.87□□□□□ -0.83
RAB5C-203ENST00000546881 C11orf65Q8NCR3 313 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 CCDC197Q8NCU1 140 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 OR10A6Q8NH74 314 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 CLDND2Q8NHS1 167 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 BCAS4Q8TDM0 211 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 SLC47A1Q96FL8 570 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 ZNF607Q96SK3 696 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 EPYCQ99645 322 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 SPATA5L1Q9BVQ7 753 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 MS4A5Q9H3V2 200 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 NANOGQ9H9S0 305 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 EFCAB1Q9HAE3 211 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 TMEM27Q9HBJ8 222 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 HIF1ANQ9NWT6 349 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 TREM2Q9NZC2 230 aa9.87□□□□□ -0.83
RAB5C-203ENST00000546881 LOC102725191A0A1B0GVB3 256 aa9.86□□□□□ -0.83
RAB5C-203ENST00000546881 FAM157AC9JC47 383 aa9.86□□□□□ -0.83
RAB5C-203ENST00000546881 C11orf98E9PRG8 122 aa9.86□□□□□ -0.83
RAB5C-203ENST00000546881 NDUFAB1O14561 156 aa9.86□□□□□ -0.83
RAB5C-203ENST00000546881 PPIHO43447 177 aaKnown RBP9.86□□□□□ -0.83
RAB5C-203ENST00000546881 TPST1O60507 370 aa9.86□□□□□ -0.83
RAB5C-203ENST00000546881 VENTXO95231 258 aa9.86□□□□□ -0.83
RAB5C-203ENST00000546881 BGLAPP02818 100 aa9.86□□□□□ -0.83
RAB5C-203ENST00000546881 PATE4P0C8F1 98 aa9.86□□□□□ -0.83
RAB5C-203ENST00000546881 NAT2P11245 290 aa9.86□□□□□ -0.83
RAB5C-203ENST00000546881 BMP2P12643 396 aa9.86□□□□□ -0.83
RAB5C-203ENST00000546881 ZNF35P13682 527 aa9.86□□□□□ -0.83
RAB5C-203ENST00000546881 ETS2P15036 469 aa9.86□□□□□ -0.83
RAB5C-203ENST00000546881 ZNF14P17017 642 aaPredicted RBP9.86□□□□□ -0.83
RAB5C-203ENST00000546881 GLRXP35754 106 aa9.86□□□□□ -0.83
RAB5C-203ENST00000546881 CSNK1A1P48729 337 aa9.86□□□□□ -0.83
RAB5C-203ENST00000546881 EVX1P49640 407 aa9.86□□□□□ -0.83
RAB5C-203ENST00000546881 RPS23P62266 143 aaKnown RBP9.86□□□□□ -0.83
RAB5C-203ENST00000546881 ACTG1P63261 375 aa9.86□□□□□ -0.83
RAB5C-203ENST00000546881 MXRA7P84157 204 aa9.86□□□□□ -0.83
RAB5C-203ENST00000546881 RUNX1T1Q06455 604 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms