RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 M0QZ24 198 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF264O43296 627 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 TMEM225BP0DP42 221 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 GPX2P18283 190 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 TRHRP34981 398 aaPredicted RBP7.21□□□□□ -1.25
VPS13D-211ENST00000543710 XCR1P46094 333 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 ARSDP51689 593 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 AKR1C2P52895 323 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 MGAT3Q09327 533 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 CAMK2BQ13554 666 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 OPCMLQ14982 345 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 KRBOX4Q5JUW0 171 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 PIP5KL1Q5T9C9 394 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 M1APQ8TC57 530 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 ALG12Q9BV10 488 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 PLEKHA2Q9HB19 425 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 SPACA1Q9HBV2 294 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 TMLHEQ9NVH6 421 aa7.21□□□□□ -1.25
VPS13D-211ENST00000543710 TXNL4BQ9NX01 149 aaKnown RBP7.21□□□□□ -1.25
VPS13D-211ENST00000543710 TLCD2A6NGC4 264 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 K7EPK0 472 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 MPPED1O15442 326 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 SMPD2O60906 423 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 F10P00742 488 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 TK1P04183 234 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 CCNOP22674 350 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 AADACP22760 399 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 CD70P32970 193 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 SOX2P48431 317 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 C17orf67Q0P5P2 114 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 AQP6Q13520 282 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 MBTPS1Q14703 1052 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 RPS26P11Q5JNZ5 115 aaPredicted RBP7.21□□□□□ -1.26
VPS13D-211ENST00000543710 AADACL4Q5VUY2 407 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 ANKRD16Q6P6B7 361 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 TRAT1Q6PIZ9 186 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.21□□□□□ -1.26
VPS13D-211ENST00000543710 OR4N5Q8IXE1 308 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 FAM71E2Q8N5Q1 922 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 IQCF1Q8N6M8 205 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 SCCPDHQ8NBX0 429 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 MORN4Q8NDC4 146 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 ASB12Q8WXK4 309 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 LINC00615Q96LM1 132 aaPredicted RBP7.21□□□□□ -1.26
VPS13D-211ENST00000543710 COL25A1Q9BXS0 654 aaPredicted RBP7.21□□□□□ -1.26
VPS13D-211ENST00000543710 SLC46A2Q9BY10 475 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 LAT2Q9GZY6 243 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 DDX31Q9H8H2 851 aaKnown RBP7.21□□□□□ -1.26
VPS13D-211ENST00000543710 RPS10P5Q9NQ39 176 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 PRSS16Q9NQE7 514 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 ZNF346Q9UL40 294 aaKnown RBP7.21□□□□□ -1.26
VPS13D-211ENST00000543710 KIAA0100Q14667 2235 aaKnown RBP7.21□□□□□ -1.26
VPS13D-211ENST00000543710 A0A1W2PPC4 97 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 MTX2O75431 263 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 NID1P14543 1247 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 RAB6AP20340 208 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 TUBG1P23258 451 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 KIR2DS2P43631 304 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 SEMA3BQ13214 749 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 IHHQ14623 411 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 RAB35Q15286 201 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 RPE65Q16518 533 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 LRFN4Q6PJG9 635 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 LIPIQ6XZB0 460 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 MCATQ8IVS2 390 aaKnown RBP7.21□□□□□ -1.26
VPS13D-211ENST00000543710 ETFBKMTQ8IXQ9 262 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 NAXEQ8NCW5 288 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 RCBTB1Q8NDN9 531 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 TMEM185AQ8NFB2 350 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 OR2T35Q8NGX2 323 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 OR6F1Q8NGZ6 308 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 RBPMSQ93062 196 aaKnown RBP7.21□□□□□ -1.26
VPS13D-211ENST00000543710 SLC35A4Q96G79 324 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 SOX17Q9H6I2 414 aaPredicted RBP7.21□□□□□ -1.26
VPS13D-211ENST00000543710 LIN28AQ9H9Z2 209 aaKnown RBP7.21□□□□□ -1.26
VPS13D-211ENST00000543710 BCL2L10Q9HD36 194 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 ZNF391Q9UJN7 358 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 LAMP3Q9UQV4 416 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 CCL21O00585 134 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 HYAL3O43820 417 aaPredicted RBP7.21□□□□□ -1.26
VPS13D-211ENST00000543710 SUSD5O60279 629 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 APOC3P02656 99 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 RAG2P55895 527 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 C21orf58P58505 322 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 UGT8Q16880 541 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 CTU2Q2VPK5 515 aaKnown RBP7.21□□□□□ -1.26
VPS13D-211ENST00000543710 LYPD4Q6UWN0 246 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 IL34Q6ZMJ4 242 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 OR2W3Q7Z3T1 314 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 GCNT2Q8N0V5 402 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 OR9Q2Q8NGE9 314 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 YIPF6Q96EC8 236 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 S1PR5Q9H228 398 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 AMBNQ9NP70 447 aa7.21□□□□□ -1.26
VPS13D-211ENST00000543710 LSM5Q9Y4Y9 91 aaKnown RBP7.21□□□□□ -1.26
VPS13D-211ENST00000543710 PPP1R2P9O14990 202 aa7.2□□□□□ -1.26
VPS13D-211ENST00000543710 ACTL6BO94805 426 aa7.2□□□□□ -1.26
VPS13D-211ENST00000543710 CSF2P04141 144 aa7.2□□□□□ -1.26
VPS13D-211ENST00000543710 MYF5P13349 255 aa7.2□□□□□ -1.26
VPS13D-211ENST00000543710 GABRA1P14867 456 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms