RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 ACADSP16219 412 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 ATP6V1B2P21281 511 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 RRM2P31350 389 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 CDKN1AP38936 164 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 PTDSS1P48651 473 aaKnown RBP9.65□□□□□ -0.86
DDB1-222ENST00000543627 IDH3GP51553 393 aaPredicted RBP9.65□□□□□ -0.86
DDB1-222ENST00000543627 SH3BGRP55822 239 aaPredicted RBP9.65□□□□□ -0.86
DDB1-222ENST00000543627 ERVK-25P63136 954 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 RUNX1T1Q06455 604 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 SEZ6L2Q6UXD5 910 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 SSX8Q7RTT4 187 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 TSEN54Q7Z6J9 526 aaKnown RBP9.65□□□□□ -0.86
DDB1-222ENST00000543627 ZNF611Q8N823 705 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 ASB10Q8WXI3 467 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 C7orf34Q96L11 122 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 LRR1Q96L50 414 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 SLC38A2Q96QD8 506 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 FOXB1Q99853 325 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 FOXC2Q99958 501 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 TMEM204Q9BSN7 226 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 CXorf56Q9H5V9 222 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 RERGLQ9H628 205 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 KRCC1Q9NPI7 259 aaPredicted RBP9.65□□□□□ -0.86
DDB1-222ENST00000543627 TAS2R1Q9NYW7 299 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 IL20RAQ9UHF4 553 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 TMCC3Q9ULS5 477 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 CCDC168Q8NDH2 2452 aa9.65□□□□□ -0.86
DDB1-222ENST00000543627 PRRC2AP48634 2157 aaKnown RBP9.64□□□□□ -0.87
DDB1-222ENST00000543627 ALPK2Q86TB3 2170 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 IGHV1-18A0A0C4DH31 117 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 SHISA9B4DS77 424 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 E7EQL1 145 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 ATP6V1G2-DDX39BF2Z307 99 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 ARHGEF9O43307 516 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 DHHO43323 396 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 OR10H3O60404 316 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 CRYAAP02489 173 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 SOD3P08294 240 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 CELA3BP08861 270 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 SLC9A3P48764 834 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 ERFP50548 548 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 ZNF84P51523 738 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 SMIM11AP58511 58 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 RPS4XP62701 263 aaKnown RBP9.64□□□□□ -0.87
DDB1-222ENST00000543627 MS4A2Q01362 244 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 PPP1R8Q12972 351 aaKnown RBP9.64□□□□□ -0.87
DDB1-222ENST00000543627 SEC23BQ15437 767 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 TAF11Q15544 211 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 SGCAQ16586 387 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 ZBED5Q49AG3 693 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 NHLRC1Q6VVB1 395 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 MDP1Q86V88 176 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 FBXL14Q8N1E6 418 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 LRRC18Q8N456 261 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 OR4K5Q8NGD3 323 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 SLC7A13Q8TCU3 470 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 TMEM54Q969K7 222 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 MCHR2Q969V1 340 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 ALPK1Q96QP1 1244 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 SH3GL3Q99963 347 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 SEC61A2Q9H9S3 476 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 OBP2BQ9NPH6 170 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 BEX4Q9NWD9 120 aaPredicted RBP9.64□□□□□ -0.87
DDB1-222ENST00000543627 ACTR3BQ9P1U1 418 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 GRHPRQ9UBQ7 328 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 PRPF19Q9UMS4 504 aaKnown RBP9.64□□□□□ -0.87
DDB1-222ENST00000543627 TMEM5Q9Y2B1 443 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 ROS1P08922 2347 aa9.64□□□□□ -0.87
DDB1-222ENST00000543627 DSCAMO60469 2012 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 A0A1W2PRQ8 180 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 ZNF503-AS2A6NEH8 195 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 UNC119BA6NIH7 251 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 H7C1C5 153 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 CDC42EP2O14613 210 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 FARS2O95363 451 aaKnown RBP9.63□□□□□ -0.87
DDB1-222ENST00000543627 SLC2A10O95528 541 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 RAB36O95755 333 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 CECR9P0C854 216 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 PGA4P0DJD7 388 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 PGA3P0DJD8 388 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 OR8G3PP0DMU2 310 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 CDAP32320 146 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 GUCA1AP43080 201 aaPredicted RBP9.63□□□□□ -0.87
DDB1-222ENST00000543627 CENPAP49450 140 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 ATP5J2P56134 94 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 RPL27P61353 136 aaKnown RBP9.63□□□□□ -0.87
DDB1-222ENST00000543627 LCN6P62502 163 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 RAB1AP62820 205 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 CHRNB3Q05901 458 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 FMODQ06828 376 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 DGCR6Q14129 220 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 TRIM25Q14258 630 aaKnown RBP9.63□□□□□ -0.87
DDB1-222ENST00000543627 SPATS1Q496A3 300 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 AGAP6Q5VW22 663 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 LRFN4Q6PJG9 635 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 B3GLCTQ6Y288 498 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 HDDC2Q7Z4H3 204 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 SKA3Q8IX90 412 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 ARHGAP24Q8N264 748 aa9.63□□□□□ -0.87
DDB1-222ENST00000543627 SLC22A24Q8N4F4 322 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms