RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 GIPRP48546 466 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 CRISP1P54107 249 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 BIDP55957 195 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 RPL27P61353 136 aaKnown RBP9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 SIRPAP78324 504 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 TFF3Q07654 80 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 MED21Q13503 144 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 HSPB2Q16082 182 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 LRRC36Q1X8D7 754 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 TSPO2Q5TGU0 170 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 TMEM236Q5W0B7 351 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 GTF2IRD2BQ6EKJ0 949 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 LRFN4Q6PJG9 635 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 GTF2IRD2Q86UP8 949 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 C20orf196Q8IYI0 205 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 LNX2Q8N448 690 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 CNEP1R1Q8N9A8 125 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 MAGEE2Q8TD90 523 aaPredicted RBP9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 TMEM54Q969K7 222 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 EME1Q96AY2 570 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 RASD2Q96D21 266 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 ZNF837Q96EG3 531 aaPredicted RBP9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 KCNK17Q96T54 332 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 C9orf16Q9BUW7 83 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 TSSK6Q9BXA6 273 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 GRIP2Q9C0E4 1043 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 OPN3Q9H1Y3 402 aaPredicted RBP9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 SLC25A19Q9HC21 320 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 KRT84Q9NSB2 600 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 RCE1Q9Y256 329 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 SLC5A6Q9Y289 635 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 NOSIPQ9Y314 301 aaKnown RBP9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 IER3IP1Q9Y5U9 82 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 ANKHD1Q8IWZ3 2542 aaKnown RBP9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 HRNRQ86YZ3 2850 aaPredicted RBP9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 TEX13CA0A0J9YWL9 993 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 ZAR1LA6NP61 321 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 A8MXE2 369 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 TRMUO75648 421 aaKnown RBP9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 SLC2A10O95528 541 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 HIST1H1CP16403 213 aaKnown RBP9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 SDHAP31040 664 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 OPRM1P35372 400 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 RPL5P46777 297 aaKnown RBP9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 ZNF133P52736 654 aaPredicted RBP9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 ESRRGP62508 458 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 NPRL3Q12980 569 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 CAMK2DQ13557 499 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 C1DQ13901 141 aaKnown RBP9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 GINS1Q14691 196 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 PTGES3Q15185 160 aaKnown RBP9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 PGGHGQ32M88 737 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 NIPAL3Q6P499 406 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 AAED1Q7RTV5 226 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 GABRG1Q8N1C3 465 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 ARIH2OSQ8N7S6 290 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 ZNF610Q8N9Z0 462 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 NPEPL1Q8NDH3 523 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 LILRB4Q8NHJ6 448 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 ZNRF4Q8WWF5 429 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 SLC25A44Q96H78 314 aaPredicted RBP9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 POLDIP3Q9BY77 421 aaKnown RBP9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 TOR3AQ9H497 397 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 C12orf49Q9H741 205 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 SLC7A10Q9NS82 523 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 TBCCD1Q9NVR7 557 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 EMC3Q9P0I2 261 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 CACNA1CQ13936 2221 aa9.42□□□□□ -0.9
NPIPB3-210ENST00000542817 A0A1W2PRG6 482 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 OR6C68A6NDL8 312 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 H7C1C5 153 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 J3QKU1 62 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 DCTN6O00399 190 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 MRPL33O75394 65 aaKnown RBP9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 BCL10O95999 233 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 IGHV3-9P01782 118 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 ITGA5P08648 1049 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 BMP5P22003 454 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 CHRNB4P30926 498 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 SLC6A6P31641 620 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 RPL4P36578 427 aaKnown RBP9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 RANBP1P43487 201 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 PER3P56645 1201 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 LCN6P62502 163 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 TOP3AQ13472 1001 aaPredicted RBP9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 ZIK1Q3SY52 487 aaPredicted RBP9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 FBXL19-AS1Q494R0 122 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 TMEM201Q5SNT2 666 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 SLC35F1Q5T1Q4 408 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 SLX4IPQ5VYV7 408 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 C12orf73Q69YU5 71 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 RPL13AP3Q6NVV1 102 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 CASP12Q6UXS9 341 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 IZUMO2Q6UXV1 221 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 C22orf34Q6ZV56 151 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 MCEMP1Q8IX19 187 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 GALNT4Q8N4A0 578 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 PACRGLQ8N7B6 248 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 UBE2FQ969M7 185 aa9.41□□□□□ -0.9
NPIPB3-210ENST00000542817 SDCCAG3Q96C92 435 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms