RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 CCR5P51681 352 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 RPS25P62851 125 aaKnown RBP9.04□□□□□ -0.96
USP35-201ENST00000526425 PEA15Q15121 130 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 RSU1Q15404 277 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 FCRL6Q6DN72 434 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 SDR9C7Q8NEX9 313 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 OR52E2Q8NGJ4 325 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 OR52I1Q8NGK6 324 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 MAFIPQ8WZ33 124 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 AP3S1Q92572 193 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 ZNF559Q9BR84 538 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 PDE7BQ9NP56 450 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 FTSJ1Q9UET6 329 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 IKZF2Q9UKS7 526 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 ELOA3DA6NLF2 546 aaPredicted RBP9.04□□□□□ -0.96
USP35-201ENST00000526425 HRKO00198 91 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 PRICKLE3O43900 615 aaPredicted RBP9.04□□□□□ -0.96
USP35-201ENST00000526425 SEMG1P04279 462 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 INSL4Q14641 139 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 ZIC1Q15915 447 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 ELOA3BQ3SY89 546 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 CDPF1Q6NVV7 123 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 LRP11Q86VZ4 500 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 GKN2Q86XP6 184 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 LDLRAD3Q86YD5 345 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 ZNF619Q8N2I2 560 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 ELOA3Q8NG57 546 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 ZNF671Q8TAW3 534 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 SFXN5Q8TD22 340 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 BPIFA2Q96DR5 249 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 MRPS24Q96EL2 167 aaKnown RBP9.04□□□□□ -0.96
USP35-201ENST00000526425 MGAT4CQ9UBM8 478 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 KIR2DS5A0A0G2JLQ3 304 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 A0A0G2JNG1 304 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 TSTD3H0UI37 97 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 KIR2DS3K7RE56 304 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 SOX1O00570 391 aaPredicted RBP9.04□□□□□ -0.96
USP35-201ENST00000526425 YIF1AO95070 293 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 CFIP05156 583 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 DBIP07108 87 aaKnown RBP9.04□□□□□ -0.96
USP35-201ENST00000526425 ACVR2AP27037 513 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 HCCSP53701 268 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 KIR2DS5Q14953 304 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 ARHGAP40Q5TG30 622 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 DMRTA1Q5VZB9 504 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 UNQ6494/PRO21346Q6UXR6 183 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 ZAR1Q86SH2 424 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 TMEM17Q86X19 198 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 LIX1LQ8IVB5 337 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 SVBPQ8N300 66 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 ARL14Q8N4G2 192 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 C19orf47Q8N9M1 422 aaKnown RBP9.04□□□□□ -0.96
USP35-201ENST00000526425 CCDC54Q8NEL0 328 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 SPRYD4Q8WW59 207 aaPredicted RBP9.04□□□□□ -0.96
USP35-201ENST00000526425 PHYHIPQ92561 330 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 CACNG6Q9BXT2 260 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 FN3KQ9H479 309 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 PPP1R14DQ9NXH3 145 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 ZNF223Q9UK11 482 aaPredicted RBP9.04□□□□□ -0.96
USP35-201ENST00000526425 SIT1Q9Y3P8 196 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 MMACHCQ9Y4U1 282 aa9.04□□□□□ -0.96
USP35-201ENST00000526425 HYKKA2RU49 373 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 AGPAT2O15120 278 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 HIST1H2ABP04908 130 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 SNRPCP09234 159 aaKnown RBP9.03□□□□□ -0.96
USP35-201ENST00000526425 FUT5Q11128 374 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 ZNF528Q3MIS6 628 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 SCGB2B2Q4G0G5 96 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 AARDQ4LEZ3 155 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 RGS7BPQ6MZT1 257 aaPredicted RBP9.03□□□□□ -0.96
USP35-201ENST00000526425 FRRS1Q6ZNA5 592 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 HIST3H2AQ7L7L0 130 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 ZNF561Q8N587 486 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 NEIL3Q8TAT5 605 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 HIST1H2ACQ93077 130 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 ADOQ96SZ5 270 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 TCEAL7Q9BRU2 100 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 ENAMQ9NRM1 1142 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 ZNF69Q9UC07 566 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 KLK4Q9Y5K2 254 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 KIF26AQ9ULI4 1882 aaPredicted RBP9.03□□□□□ -0.96
USP35-201ENST00000526425 PRODHO43272 600 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 HSPA12AO43301 675 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 SLC43A1O75387 559 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 SLC2A1P11166 492 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 CD27P26842 260 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 AVPR2P30518 371 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 SLC1A3P43003 542 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 NR0B1P51843 470 aaKnown RBP9.03□□□□□ -0.96
USP35-201ENST00000526425 WNT4P56705 351 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 TSPAN31Q12999 210 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 FAM180AQ6UWF9 173 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 IL20RBQ6UXL0 311 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 SLC22A18ASQ8N1D0 253 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 BAHD1Q8TBE0 780 aaPredicted RBP9.03□□□□□ -0.96
USP35-201ENST00000526425 SCMH1Q96GD3 660 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 TNFRSF13CQ96RJ3 184 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 GGACTQ9BVM4 153 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 REG4Q9BYZ8 158 aa9.03□□□□□ -0.96
USP35-201ENST00000526425 TOLLIPQ9H0E2 274 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms