RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 NFKBIDQ8NI38 313 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 MIPOL1Q8TD10 442 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 LRRC8CQ8TDW0 803 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 DUSP19Q8WTR2 217 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 FAM222BQ8WU58 562 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 NRGNQ92686 78 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 RNASE6Q93091 150 aaKnown RBP3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 INTS12Q96CB8 462 aaKnown RBP3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 PPCDCQ96CD2 204 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 FAM120BQ96EK7 910 aaKnown RBP3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 ZBED6CLQ96FA7 236 aaPredicted RBP3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 C16orf58Q96GQ5 468 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 SFXN2Q96NB2 322 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 ZFP3Q96NJ6 502 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 CCDC115Q96NT0 180 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 ZNF317Q96PQ6 595 aaPredicted RBP3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 C1orf50Q9BV19 199 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 DPY30Q9C005 99 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 C3orf14Q9HBI5 128 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 NOX4Q9NPH5 578 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 SDHAF3Q9NRP4 125 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 ATAD3AQ9NVI7 634 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 DDX18Q9NVP1 670 aaKnown RBP3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 AIG1Q9NVV5 245 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 FAM120CQ9NX05 1096 aaKnown RBP3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 MED11Q9P086 117 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 CLCF1Q9UBD9 225 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 MALT1Q9UDY8 824 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 MARCOQ9UEW3 520 aaPredicted RBP3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 BTNL2Q9UIR0 455 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 DKKL1Q9UK85 242 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 MRTO4Q9UKD2 239 aaKnown RBP3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 MKLN1Q9UL63 735 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 PROCRQ9UNN8 238 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 ABCG2Q9UNQ0 655 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 RPH3AQ9Y2J0 694 aaPredicted RBP3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 PCDHGB1Q9Y5G3 927 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 USH1CQ9Y6N9 552 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 PKDREJQ9NTG1 2253 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 ARHGAP21Q5T5U3 1957 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 NAV2Q8IVL1 2488 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 CACNA1DQ01668 2161 aa3.1□□□□□ -1.91
UBE2D3-226ENST00000508635 HCFC1P51610 2035 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 IGLV3-32A0A0A0MS00 114 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 GOLGA8QA0A0J9YX86 632 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 A0A1W2PNV4 684 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 OR2M5A3KFT3 312 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 GOLGA8OA6NCC3 632 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 TUBAL3A6NHL2 446 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 A8MXE2 369 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 NPIPB9F8W1W9 429 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 GOLGA8NF8WBI6 632 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 UBDO15205 165 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 DIAPH2O60879 1101 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 TNFSF13O75888 250 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 KCNK2O95069 426 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 UTS2O95399 124 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 ANGPTL1O95841 491 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 C6orf47O95873 294 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 HMGN2P05204 90 aaKnown RBP3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 IL6P05231 212 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 ALOX5P09917 674 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 ZCCHC18P0CG32 403 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 ACP2P11117 423 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 UBL4AP11441 157 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 CD1EP15812 388 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 EFNA1P20827 205 aaPredicted RBP3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 TBXA2RP21731 343 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 UQCRC2P22695 453 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 TCEA1P23193 301 aaKnown RBP3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 S100A3P33764 101 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 HPCAL1P37235 193 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 RFX3P48380 749 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 CCT3P49368 545 aaKnown RBP3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 COMPP49747 757 aaPredicted RBP3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 ATP4BP51164 291 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 ART1P52961 327 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 IST1P53990 364 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 CLNS1AP54105 237 aaKnown RBP3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 PSMD4P55036 377 aaKnown RBP3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 AQP5P55064 265 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 SEC61A1P61619 476 aaKnown RBP3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 EEF1A1P68104 462 aaKnown RBP3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 C17orf67Q0P5P2 114 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 LRRC74AQ0VAA2 488 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 STX5Q13190 355 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 GANABQ14697 944 aaKnown RBP3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 ZNHIT3Q15649 155 aaPredicted RBP3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 C2orf68Q2NKX9 166 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 TMEM44Q2T9K0 475 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 GLYR1Q49A26 553 aaPredicted RBP3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 VPS26BQ4G0F5 336 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 KLHL26Q53HC5 615 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 SPANXN4Q5MJ08 99 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 INTS11Q5TA45 600 aaKnown RBP3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 EEF1A1P5Q5VTE0 462 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 RAET1LQ5VY80 246 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 OR4F3Q6IEY1 312 aa3.09□□□□□ -1.91
UBE2D3-226ENST00000508635 CGB2Q6NT52 195 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms