RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 ECH1Q13011 328 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 CYTH1Q15438 398 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 FAM83EQ2M2I3 478 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 LIN9Q5TKA1 542 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 C1orf146Q5VVC0 180 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 ANKRD26P1Q6NSI1 321 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 MOB1BQ7L9L4 216 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 MRPL21Q7Z2W9 205 aaKnown RBP2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 PEX26Q7Z412 305 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 ZNF546Q86UE3 836 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 NAXDQ8IW45 347 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 ZNF100Q8IYN0 542 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 CMTM8Q8IZV2 173 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 SLC39A11Q8N1S5 342 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 DRAXINQ8NBI3 349 aaPredicted RBP2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 OR51S1Q8NGJ8 323 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 CAPSLQ8WWF8 208 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 CHCHD10Q8WYQ3 142 aaPredicted RBP2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 OR1E3Q8WZA6 343 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 NAT6Q93015 286 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 TOP1MTQ969P6 601 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 TMEM175Q9BSA9 504 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 ACTR3CQ9C0K3 210 aaPredicted RBP2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 C20orf85Q9H1P6 137 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 Q9H3A6 140 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 ABCD2Q9UBJ2 740 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 LGALS13Q9UHV8 139 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 KIF25Q9UIL4 384 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 UGT2A1Q9Y4X1 527 aa2.97□□□□□ -1.93
TRAPPC13-208ENST00000505553 IGLV3-22A0A075B6J6 115 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 USP27XA6NNY8 438 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 C12orf71A8MTZ7 269 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 HSBP1O75506 76 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 EIF3GO75821 320 aaKnown RBP eCLIP2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 TBX6O95947 436 aaPredicted RBP2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 APOA1P02647 267 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 IFNW1P05000 195 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 HOXB8P17481 243 aaPredicted RBP2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 BTDP43251 543 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 KLK7P49862 253 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 SLC26A2P50443 739 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 PSMD4P55036 377 aaKnown RBP2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 MECOMQ03112 1051 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 ATP6AP1Q15904 470 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZNF829Q3KNS6 432 aaPredicted RBP2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 TIMM50Q3ZCQ8 353 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 PRR30Q53SZ7 412 aaPredicted RBP2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 C1orf94Q6P1W5 598 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 ULK3Q6PHR2 472 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 TMIGD1Q6UXZ0 262 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZNF440Q8IYI8 595 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 PRR22Q8IZ63 422 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 MYOCDQ8IZQ8 938 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 PUSL1Q8N0Z8 303 aaKnown RBP2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 OR13C9Q8NGT0 318 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 OR52E5Q8NH55 327 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZNF502Q8TBZ5 544 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 LKAAEAR1Q8TD35 194 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 PIH1D2Q8WWB5 315 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 ACOT11Q8WXI4 607 aaPredicted RBP2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 FGF14Q92915 247 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 NEIL2Q969S2 332 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 SMIM14Q96QK8 99 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 RANBP9Q96S59 729 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 KIR2DL4Q99706 377 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 SOSTQ9BQB4 213 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 CNPY3Q9BT09 278 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 NAT9Q9BTE0 207 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 RIOK2Q9BVS4 552 aaKnown RBP2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 UCK2Q9BZX2 261 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 PIGUQ9H490 435 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 RNF167Q9H6Y7 350 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 CWH43Q9H720 699 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 SIAEQ9HAT2 523 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 FLVCR2Q9UPI3 526 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 GOLT1BQ9Y3E0 138 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 PRSS21Q9Y6M0 314 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 NOTCH3Q9UM47 2321 aa2.96□□□□□ -1.94
TRAPPC13-208ENST00000505553 CNTNAP1P78357 1384 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 TRAV6A0A075B6T7 132 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 A0A087WYN8 130 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 A0A1B0GU03 582 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 GSTTP1A0A1W2PQM5 241 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 FAM231BA6NCW3 169 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 LYRM9A8MSI8 78 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 AGPAT2O15120 278 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 SERPINA5P05154 406 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 DCNP07585 359 aaKnown RBP2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 CCDC166P0CW27 439 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 GDF1P27539 372 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 PRKAR2BP31323 418 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 RGRP47804 291 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 NPBWR2P48146 333 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 STXBP1P61764 594 aaKnown RBP2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 CSNK1G2P78368 415 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 PDIA2Q13087 525 aaKnown RBP2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 TRAM2Q15035 370 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 VAX1Q5SQQ9 334 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 SLC25A25Q6KCM7 469 aa2.95□□□□□ -1.94
TRAPPC13-208ENST00000505553 TFAP2EQ6VUC0 442 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms