RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 EDEM2Q9BV94 578 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 TTTY10Q9BZA0 68 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 SPRTNQ9H040 489 aaPredicted RBP4.72□□□□□ -1.65
CLDND1-208ENST00000503004 OR51B6Q9H340 312 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 OR52D1Q9H346 318 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 OPA3Q9H6K4 179 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 EXOSC3Q9NQT5 275 aaKnown RBP4.72□□□□□ -1.65
CLDND1-208ENST00000503004 MRPS18AQ9NVS2 196 aaKnown RBP4.72□□□□□ -1.65
CLDND1-208ENST00000503004 PPP4R1LQ9P1A2 415 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 FOXD3Q9UJU5 478 aaPredicted RBP4.72□□□□□ -1.65
CLDND1-208ENST00000503004 CBLCQ9ULV8 474 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 TRAV27A0A087WT01 109 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 GXYLT2A0PJZ3 443 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 SGK494L7N484 410 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 RAD1O60671 282 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 GYPBP06028 91 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 MRPL3P09001 348 aaKnown RBP4.72□□□□□ -1.65
CLDND1-208ENST00000503004 SMIM10L1P0DMW3 83 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 SAGP10523 405 aaPredicted RBP4.72□□□□□ -1.65
CLDND1-208ENST00000503004 PEPDP12955 493 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 TBXA2RP21731 343 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 HNRNPA2B1P22626 353 aaKnown RBP4.72□□□□□ -1.65
CLDND1-208ENST00000503004 NDUFS1P28331 727 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 NOS3P29474 1203 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 CALCRP30988 508 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 TLX1P31314 330 aaPredicted RBP4.72□□□□□ -1.65
CLDND1-208ENST00000503004 TNFRSF4P43489 277 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 RGS19P49795 217 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 SELENOPP49908 381 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 CCR6P51684 374 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 CARD18P57730 90 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 RAB5BP61020 215 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 RIPPLY1Q0D2K3 151 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 C1orf61Q13536 156 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 SF3A2Q15428 464 aaKnown RBP4.72□□□□□ -1.65
CLDND1-208ENST00000503004 OR1Q1Q15612 314 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 NNATQ16517 81 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 ARHGAP11BQ3KRB8 267 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 PLA1AQ53H76 456 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 ZNF628Q5EBL2 1059 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 EOGTQ5NDL2 527 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 FAM27D1Q5T7N8 215 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 TCEAL6Q6IPX3 200 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 ZNF613Q6PF04 617 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 FAM198BQ6UWH4 519 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 QSOX2Q6ZRP7 698 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 Q6ZSR6 202 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 RABEPKQ7Z6M1 372 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 NR2C2APQ86WQ0 139 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 SLC22A18ASQ8N1D0 253 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 COX18Q8N8Q8 333 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 RELL2Q8NC24 303 aaPredicted RBP4.72□□□□□ -1.65
CLDND1-208ENST00000503004 OR13H1Q8NG92 308 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 OR4N2Q8NGD1 307 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 OR13C2Q8NGS9 318 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 RPLP0P6Q8NHW5 317 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 RFKQ969G6 155 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 RERGQ96A58 199 aaPredicted RBP4.72□□□□□ -1.65
CLDND1-208ENST00000503004 KIAA1143Q96AT1 154 aaPredicted RBP4.72□□□□□ -1.65
CLDND1-208ENST00000503004 ELMOD3Q96FG2 381 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 SMIM10Q96HG1 83 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 KCNJ15Q99712 375 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 ATG101Q9BSB4 218 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 ZNF350Q9GZX5 532 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 OR51V1Q9H2C8 321 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 PPP1R3EQ9H7J1 279 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 KLHL1Q9NR64 748 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 ZFP57Q9NU63 452 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 DZANK1Q9NVP4 752 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 HRASLS2Q9NWW9 162 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 SIDT1Q9NXL6 827 aaKnown RBP4.72□□□□□ -1.65
CLDND1-208ENST00000503004 CLEC1BQ9P126 229 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 USP36Q9P275 1121 aaKnown RBP4.72□□□□□ -1.65
CLDND1-208ENST00000503004 METTL1Q9UBP6 276 aaKnown RBP4.72□□□□□ -1.65
CLDND1-208ENST00000503004 SCP2D1Q9UJQ7 156 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 PILRAQ9UKJ1 303 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 SIRT4Q9Y6E7 314 aaPredicted RBP4.72□□□□□ -1.65
CLDND1-208ENST00000503004 SLCO1B1Q9Y6L6 691 aa4.72□□□□□ -1.65
CLDND1-208ENST00000503004 ARID1BQ8NFD5 2236 aaPredicted RBP4.71□□□□□ -1.65
CLDND1-208ENST00000503004 CABIN1Q9Y6J0 2220 aa4.71□□□□□ -1.65
CLDND1-208ENST00000503004 ASXL3Q9C0F0 2248 aa4.71□□□□□ -1.66
CLDND1-208ENST00000503004 CDHR4A6H8M9 788 aa4.71□□□□□ -1.66
CLDND1-208ENST00000503004 DISC1C4P0D8 188 aa4.71□□□□□ -1.66
CLDND1-208ENST00000503004 HRKO00198 91 aa4.71□□□□□ -1.66
CLDND1-208ENST00000503004 GABRPO00591 440 aa4.71□□□□□ -1.66
CLDND1-208ENST00000503004 EEF1E1O43324 174 aaKnown RBP4.71□□□□□ -1.66
CLDND1-208ENST00000503004 PRKNO60260 465 aaPredicted RBP4.71□□□□□ -1.66
CLDND1-208ENST00000503004 TMEM127O75204 238 aa4.71□□□□□ -1.66
CLDND1-208ENST00000503004 ANKRD34CP0C6C1 535 aa4.71□□□□□ -1.66
CLDND1-208ENST00000503004 SULT1A3P0DMM9 295 aa4.71□□□□□ -1.66
CLDND1-208ENST00000503004 SULT1A4P0DMN0 295 aa4.71□□□□□ -1.66
CLDND1-208ENST00000503004 NID1P14543 1247 aa4.71□□□□□ -1.66
CLDND1-208ENST00000503004 ZNF44P15621 663 aa4.71□□□□□ -1.66
CLDND1-208ENST00000503004 ADCYAP1P18509 176 aa4.71□□□□□ -1.66
CLDND1-208ENST00000503004 GIFP27352 417 aa4.71□□□□□ -1.66
CLDND1-208ENST00000503004 LCN1P31025 176 aa4.71□□□□□ -1.66
CLDND1-208ENST00000503004 GABRA3P34903 492 aa4.71□□□□□ -1.66
CLDND1-208ENST00000503004 STAT5AP42229 794 aa4.71□□□□□ -1.66
CLDND1-208ENST00000503004 KIR3DL2P43630 455 aa4.71□□□□□ -1.66
CLDND1-208ENST00000503004 DUSP8Q13202 625 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms