RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 RPL18Q07020 188 aaKnown RBP9.19□□□□□ -0.94
NELFE-213ENST00000494956 ZP4Q12836 540 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 ETFDHQ16134 617 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 KRTAP21-3Q3LHN1 58 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 ERICH5Q6P6B1 374 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 NANOGNBQ7Z5D8 188 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 SKA3Q8IX90 412 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 PCYOX1LQ8NBM8 494 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 RBM15BQ8NDT2 890 aaKnown RBP9.19□□□□□ -0.94
NELFE-213ENST00000494956 ANKK1Q8NFD2 765 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 RASSF5Q8WWW0 418 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 MPP4Q96JB8 637 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 LRR1Q96L50 414 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 ZNF347Q96SE7 839 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 SH3GL3Q99963 347 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 VRK1Q99986 396 aaPredicted RBP9.19□□□□□ -0.94
NELFE-213ENST00000494956 ELAC2Q9BQ52 826 aaKnown RBP9.19□□□□□ -0.94
NELFE-213ENST00000494956 RHNO1Q9BSD3 238 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 FAM107BQ9H098 131 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 BARX1Q9HBU1 254 aaPredicted RBP9.19□□□□□ -0.94
NELFE-213ENST00000494956 GLTPQ9NZD2 209 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 ZNF229Q9UJW7 825 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 BAG5Q9UL15 447 aa9.19□□□□□ -0.94
NELFE-213ENST00000494956 IGKV1D-43A0A0B4J1Z2 117 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 TMEM129A0AVI4 362 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 OR7A10O76100 309 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 OR5F1O95221 314 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 MT-ND1P03886 318 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 HIST1H2ABP04908 130 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 IGFBP1P08833 259 aaPredicted RBP9.18□□□□□ -0.94
NELFE-213ENST00000494956 PGA4P0DJD7 388 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 PGA3P0DJD8 388 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 ZNF14P17017 642 aaPredicted RBP9.18□□□□□ -0.94
NELFE-213ENST00000494956 GIPRP48546 466 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 SLC7A2P52569 658 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 GYS2P54840 703 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 PPP2R2BQ00005 443 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 CHRNB3Q05901 458 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 SNTB2Q13425 540 aaKnown RBP9.18□□□□□ -0.94
NELFE-213ENST00000494956 RAB39AQ14964 217 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 LAPTM4AQ15012 233 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 CARTPTQ16568 116 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 GSG1Q2KHT4 349 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 CLEC2AQ6UVW9 174 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 HIST3H2AQ7L7L0 130 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 IGFN1Q86VF2 1251 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 CDK20Q8IZL9 346 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 SVOPLQ8N434 492 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 SYT14Q8NB59 555 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 OR6X1Q8NH79 312 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 RP9Q8TA86 221 aaKnown RBP9.18□□□□□ -0.94
NELFE-213ENST00000494956 C10orf105Q8TEF2 133 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 TMEM239Q8WW34 195 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 FAM168AQ92567 244 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 HIST1H2ACQ93077 130 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 SGTBQ96EQ0 304 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 MED4Q9NPJ6 270 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 B3GAT2Q9NPZ5 323 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 YAE1D1Q9NRH1 226 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 FZR1Q9UM11 496 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 A4GNTQ9UNA3 340 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 PMF1-BGLAPU3KQ54 211 aa9.18□□□□□ -0.94
NELFE-213ENST00000494956 HIVEP2P31629 2446 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 hCG_2039718K7EN88 272 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 CXCR6O00574 342 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 FFAR1O14842 300 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 TRMUO75648 421 aaKnown RBP9.17□□□□□ -0.94
NELFE-213ENST00000494956 ZNF682O95780 498 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 BCL10O95999 233 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 QDPRP09417 244 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 CCL2P13500 99 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 MAKP20794 623 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 ARR3P36575 388 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 GSK3BP49841 420 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 NUDT2P50583 147 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 EFNA4P52798 201 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 SNRPD2P62316 118 aaKnown RBP9.17□□□□□ -0.94
NELFE-213ENST00000494956 RAB1AP62820 205 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 SELENOWP63302 87 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 FMODQ06828 376 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 TOP3AQ13472 1001 aaPredicted RBP9.17□□□□□ -0.94
NELFE-213ENST00000494956 DAG1Q14118 895 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 C3orf36Q3SXR2 165 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 C8orf82Q6P1X6 216 aaPredicted RBP9.17□□□□□ -0.94
NELFE-213ENST00000494956 TBPL2Q6SJ96 375 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 ZNF627Q7L945 461 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 SPATA21Q7Z572 469 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 LRP11Q86VZ4 500 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 ZNF584Q8IVC4 421 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 SLC22A24Q8N4F4 322 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 CLDN22Q8N7P3 220 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 FAM169BQ8N8A8 192 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 NUP37Q8NFH4 326 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 ASB10Q8WXI3 467 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 MCHR2Q969V1 340 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 ZNF566Q969W8 418 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 SLC25A44Q96H78 314 aaPredicted RBP9.17□□□□□ -0.94
NELFE-213ENST00000494956 SLC19A3Q9BZV2 496 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 OR51B6Q9H340 312 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 PLK3Q9H4B4 646 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms