RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 TSPAN31Q12999 210 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 PPA1Q15181 289 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 HIST3H3Q16695 136 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 CEACAM16Q2WEN9 425 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 PHYHD1Q5SRE7 291 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 ARMC4Q5T2S8 1044 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 FAM205BPQ63HN1 556 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 PGBD2Q6P3X8 592 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 SMARCD3Q6STE5 483 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 LINGO2Q7L985 606 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 WDFY1Q8IWB7 410 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 OR1K1Q8NGR3 316 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 FNDC8Q8TC99 324 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 TMEM54Q969K7 222 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 SLCO4A1Q96BD0 722 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 DUS3LQ96G46 650 aaKnown RBP9.51□□□□□ -0.89
ATG4B-219ENST00000479941 TSPAN32Q96QS1 320 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 GPX7Q96SL4 187 aaPredicted RBP9.51□□□□□ -0.89
ATG4B-219ENST00000479941 GPA33Q99795 319 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 POLDIP3Q9BY77 421 aaKnown RBP9.51□□□□□ -0.89
ATG4B-219ENST00000479941 MRPL13Q9BYD1 178 aaKnown RBP9.51□□□□□ -0.89
ATG4B-219ENST00000479941 ULBP2Q9BZM5 246 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 OBP2BQ9NPH6 170 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 SLC17A5Q9NRA2 495 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 RASSF1Q9NS23 344 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 DNAJB9Q9UBS3 223 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 ZNF346Q9UL40 294 aaKnown RBP9.51□□□□□ -0.89
ATG4B-219ENST00000479941 AMDHD2Q9Y303 409 aa9.51□□□□□ -0.89
ATG4B-219ENST00000479941 NAV2Q8IVL1 2488 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 CACNA1DQ01668 2161 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 ARRDC5A6NEK1 342 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 A6NIZ1 184 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 DEAF1O75398 565 aaPredicted RBP9.5□□□□□ -0.89
ATG4B-219ENST00000479941 TRMUO75648 421 aaKnown RBP9.5□□□□□ -0.89
ATG4B-219ENST00000479941 WNT11O96014 354 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 GASTP01350 101 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 ZNF26P17031 533 aaPredicted RBP9.5□□□□□ -0.89
ATG4B-219ENST00000479941 ACVR1BP36896 505 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 ARHGDIAP52565 204 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 NR1H2P55055 460 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 RAP1BP61224 184 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 RAP1AP62834 184 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 ARF1P84077 181 aaKnown RBP9.5□□□□□ -0.89
ATG4B-219ENST00000479941 GABPB1Q06547 395 aaPredicted RBP9.5□□□□□ -0.89
ATG4B-219ENST00000479941 CCNIQ14094 377 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 RFX4Q33E94 735 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 TBRG1Q3YBR2 411 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 BEX5Q5H9J7 111 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 FBXW10Q5XX13 1052 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 ZNF770Q6IQ21 691 aaPredicted RBP9.5□□□□□ -0.89
ATG4B-219ENST00000479941 RPL13AP3Q6NVV1 102 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 ANKRD16Q6P6B7 361 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 KLHL24Q6TFL4 600 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 DPY19L2P2Q6ZN68 376 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 ZNF627Q7L945 461 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 IGFN1Q86VF2 1251 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 TMEM200AQ86VY9 491 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 WFDC8Q8IUA0 241 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 NOXO1Q8NFA2 376 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 OR10G2Q8NGC3 310 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 OR9Q2Q8NGE9 314 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 FANK1Q8TC84 345 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 MAGEE2Q8TD90 523 aaPredicted RBP9.5□□□□□ -0.89
ATG4B-219ENST00000479941 BCL2L2Q92843 193 aaPredicted RBP9.5□□□□□ -0.89
ATG4B-219ENST00000479941 ALG12Q9BV10 488 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 KATNB1Q9BVA0 655 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 OR52D1Q9H346 318 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 NRIP3Q9NQ35 241 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 ARMC1Q9NVT9 282 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 VNN3Q9NY84 501 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 GRHPRQ9UBQ7 328 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 MGAT4BQ9UQ53 548 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 POFUT2Q9Y2G5 429 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 AP4S1Q9Y587 144 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 MAGED1Q9Y5V3 778 aaPredicted RBP9.5□□□□□ -0.89
ATG4B-219ENST00000479941 SLC25A15Q9Y619 301 aa9.5□□□□□ -0.89
ATG4B-219ENST00000479941 CSMD2Q7Z408 3487 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 PRR14LQ5THK1 2151 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 DEFB108AA8MXU0 73 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 XKRYO14609 159 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 DHHO43323 396 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 E2F6O75461 281 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 TIPRLO75663 272 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 HRGP04196 525 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 QDPRP09417 244 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 APEHP13798 732 aaKnown RBP9.49□□□□□ -0.89
ATG4B-219ENST00000479941 GSTM3P21266 225 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 SLC6A6P31641 620 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 RPS6KA3P51812 740 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 ZNF133P52736 654 aaPredicted RBP9.49□□□□□ -0.89
ATG4B-219ENST00000479941 FXYD6P3P58550 94 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 ACTR3P61158 418 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 ERVK-25P63136 954 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 RUNX1T1Q06455 604 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 COX10Q12887 443 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 TOP3AQ13472 1001 aaPredicted RBP9.49□□□□□ -0.89
ATG4B-219ENST00000479941 HIKESHIQ53FT3 197 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 THEM4Q5T1C6 240 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 GPR139Q6DWJ6 353 aa9.49□□□□□ -0.89
ATG4B-219ENST00000479941 ALKBH2Q6NS38 261 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms