RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 OR1J1Q8NGS3 322 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 UBE2E3Q969T4 207 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 CDC6Q99741 560 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 RGCCQ9H4X1 137 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 BCO1Q9HAY6 547 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 PCDHB8Q9UN66 801 aa12.63□□□□□ -0.39
HDAC1-206ENST00000476391 RPL36A-HNRNPH2H7BZ11 118 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 RCBTB2O95199 551 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 AK1P00568 194 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 LRG1P02750 347 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 THY1P04216 161 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 ADRB3P13945 408 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 PRSS3P35030 304 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 AQP2P41181 271 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 TSPAN7P41732 249 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 SULT1A1P50225 295 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 SGSHP51688 502 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 GAS6Q14393 721 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 OR8G1Q15617 311 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 USF2Q15853 346 aaPredicted RBP12.62□□□□□ -0.39
HDAC1-206ENST00000476391 ALKBH2Q6NS38 261 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 CRTC1Q6UUV9 634 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 TMEM205Q6UW68 189 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 BTNL8Q6UX41 500 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 HEPN1Q6WQI6 88 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 SAMD7Q7Z3H4 446 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 TMEM173Q86WV6 379 aaPredicted RBP12.62□□□□□ -0.39
HDAC1-206ENST00000476391 RPS4Y2Q8TD47 263 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 MAFIPQ8WZ33 124 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 MS4A4AQ96JQ5 239 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 CDCA3Q99618 268 aaPredicted RBP12.62□□□□□ -0.39
HDAC1-206ENST00000476391 KATNBL1Q9H079 304 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 ZCCHC3Q9NUD5 404 aaKnown RBP12.62□□□□□ -0.39
HDAC1-206ENST00000476391 SIDT1Q9NXL6 827 aaKnown RBP12.62□□□□□ -0.39
HDAC1-206ENST00000476391 DOK5Q9P104 306 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 STEAP1Q9UHE8 339 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 FBXO4Q9UKT5 387 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 NPIPB15A6NHN6 443 aaPredicted RBP12.62□□□□□ -0.39
HDAC1-206ENST00000476391 RAB3DO95716 219 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 CLUP10909 449 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 MAPK8P45983 427 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 TBPL1P62380 186 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 CYB5R2Q6BCY4 276 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 ZNF574Q6ZN55 896 aaPredicted RBP12.62□□□□□ -0.39
HDAC1-206ENST00000476391 FRRS1Q6ZNA5 592 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 TPRG1Q6ZUI0 275 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 NRROSQ86YC3 692 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 RFLNBQ8N5W9 214 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 TMEM229BQ8NBD8 167 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 BEND2Q8NDZ0 799 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 OR8S1Q8NH09 359 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 OR8D1Q8WZ84 308 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 DCUN1D4Q92564 292 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 MCHR1Q99705 422 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 SYT4Q9H2B2 425 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 PARP11Q9NR21 331 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 SLC45A1Q9Y2W3 748 aa12.62□□□□□ -0.39
HDAC1-206ENST00000476391 MARCH11A6NNE9 402 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 H7C1Q1 480 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 M0R036 132 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 PMP2P02689 132 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 CRHP06850 196 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 HEXBP07686 556 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 CRABP1P29762 137 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 PPICP45877 212 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 ADPRHP54922 357 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 NDUFA6P56556 154 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 GUCA2AQ02747 115 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 SRSF5Q13243 272 aaKnown RBP12.61□□□□□ -0.39
HDAC1-206ENST00000476391 LYG2Q86SG7 212 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 SECTM1Q8WVN6 248 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 ASB17Q8WXJ9 295 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 DVL3Q92997 716 aaPredicted RBP12.61□□□□□ -0.39
HDAC1-206ENST00000476391 TGM7Q96PF1 710 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 MYADMQ96S97 322 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 UNKLQ9H9P5 680 aaKnown RBP12.61□□□□□ -0.39
HDAC1-206ENST00000476391 YBX2Q9Y2T7 364 aaKnown RBP12.61□□□□□ -0.39
HDAC1-206ENST00000476391 CSAG2Q9Y5P2 127 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 FLVCR1Q9Y5Y0 555 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 ELOA3CA0A087WX78 387 aaPredicted RBP12.61□□□□□ -0.39
HDAC1-206ENST00000476391 EIF1AYO14602 144 aaKnown RBP12.61□□□□□ -0.39
HDAC1-206ENST00000476391 P2RX6O15547 441 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 CTAG2O75638 210 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 WNT11O96014 354 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 DPEP1P16444 411 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 LPAR6P43657 344 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 EIF1AXP47813 144 aaKnown RBP12.61□□□□□ -0.39
HDAC1-206ENST00000476391 SLC7A9P82251 487 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 NR0B2Q15466 257 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 AMZ1Q400G9 498 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 ACTBL2Q562R1 376 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 HIST2H3PS2Q5TEC6 136 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 YOD1Q5VVQ6 348 aaPredicted RBP12.61□□□□□ -0.39
HDAC1-206ENST00000476391 C16orf59Q7L2K0 433 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 VRK2Q86Y07 508 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 OR5R1Q8NH85 324 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 GPX8Q8TED1 209 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 MITD1Q8WV92 249 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 PHB2Q99623 299 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 TTTY10Q9BZA0 68 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms