RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 CACNA1CQ13936 2221 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 ALPK2Q86TB3 2170 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 TRAV18A0A075B6X5 111 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 TBC1D3IA0A087WXS9 549 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 RFPL4AA6NLU0 287 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 RFPL4AL1F8VTS6 287 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 BLOC1S5-TXNDC5H3BN57 136 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 H3BUI4 141 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 ZNF254O75437 659 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 AKAIN1P0CW23 69 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 PRKACAP17612 351 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 RPS27P42677 84 aaKnown RBP11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 PGDP52209 483 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 SLC25A1P53007 311 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 C4orf46Q504U0 113 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 FAM74A1Q5RGS3 127 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 C11orf88Q6PI97 169 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 NPSR1Q6W5P4 371 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 CDC20BQ86Y33 519 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 RCBTB1Q8NDN9 531 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 PXT1Q8NFP0 134 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 RBM18Q96H35 190 aaKnown RBP11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 CERS4Q9HA82 394 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 SRA1Q9HD15 236 aaKnown RBP11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 STARD5Q9NSY2 213 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 ACTR10Q9NZ32 417 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 LRIT1Q9P2V4 623 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 SLC6A5Q9Y345 797 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 OR6C74A6NCV1 312 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 FAM74A7A6NL05 159 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 EIF4E2O60573 245 aaKnown RBP11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 IFI6P09912 130 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 ACHEP22303 614 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 SCAND1P57086 179 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 NNATQ16517 81 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 FAM74A3Q4VXF1 159 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 KRT77Q7Z794 578 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 JAZF1Q86VZ6 243 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 PRSS35Q8N3Z0 413 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 LRRC75AQ8NAA5 344 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 CLEC1AQ8NC01 280 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 LSM14AQ8ND56 463 aaKnown RBP11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 OR8S1Q8NH09 359 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 ZNF417Q8TAU3 575 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 ST8SIA2Q92186 375 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 SPACA7Q96KW9 195 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 WDR13Q9H1Z4 485 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 SLC25A32Q9H2D1 315 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 EXO5Q9H790 373 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 BARX1Q9HBU1 254 aaPredicted RBP11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 ZNF230Q9UIE0 474 aaPredicted RBP11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 IKZF2Q9UKS7 526 aa11.8□□□□□ -0.52
PDZRN3-205ENST00000466780 H7C1C5 153 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 OR10H2O60403 315 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 ITGA5P08648 1049 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 SLC35E2P0CK97 266 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 POU3F4P49335 361 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 PRPS1P60891 318 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 LCN6P62502 163 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 ZNF169Q14929 603 aaPredicted RBP11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 TANGO2Q6ICL3 276 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 OR4C3Q8NH37 302 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 RERGQ96A58 199 aaPredicted RBP11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 VSTM2LQ96N03 204 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 MOGAT1Q96PD6 335 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 NPAS1Q99742 590 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 NKX3-1Q99801 234 aaPredicted RBP11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 C1orf198Q9H425 327 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 POFUT1Q9H488 388 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 USP34Q70CQ2 3546 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 EFCAB7A8K855 629 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 PRAMEF2O60811 474 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 AKR7A3O95154 331 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 PLATP00750 562 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 CSTAP01040 98 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 ITGB2P05107 769 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 GUSBP08236 651 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 FBXO45P0C2W1 286 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 ENPP2Q13822 863 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 MCATQ8IVS2 390 aaKnown RBP11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 ZNF676Q8N7Q3 588 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 OR10K1Q8NGX5 313 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 MCHR2Q969V1 340 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 ZNF416Q9BWM5 594 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 RASL12Q9NYN1 266 aa11.79□□□□□ -0.52
PDZRN3-205ENST00000466780 NUP210LQ5VU65 1888 aa11.78□□□□□ -0.52
PDZRN3-205ENST00000466780 ARHGEF17Q96PE2 2063 aaPredicted RBP11.78□□□□□ -0.52
PDZRN3-205ENST00000466780 TGFBR3LH3BV60 316 aa11.78□□□□□ -0.52
PDZRN3-205ENST00000466780 HCRTR1O43613 425 aa11.78□□□□□ -0.52
PDZRN3-205ENST00000466780 PLRG1O43660 514 aaKnown RBP11.78□□□□□ -0.52
PDZRN3-205ENST00000466780 RDH16O75452 317 aa11.78□□□□□ -0.52
PDZRN3-205ENST00000466780 RASGRP1O95267 797 aa11.78□□□□□ -0.52
PDZRN3-205ENST00000466780 CD14P08571 375 aa11.78□□□□□ -0.52
PDZRN3-205ENST00000466780 ACTR1BP42025 376 aa11.78□□□□□ -0.52
PDZRN3-205ENST00000466780 KIR3DL2P43630 455 aa11.78□□□□□ -0.52
PDZRN3-205ENST00000466780 ARHGDIBP52566 201 aa11.78□□□□□ -0.52
PDZRN3-205ENST00000466780 ACTR1AP61163 376 aa11.78□□□□□ -0.52
PDZRN3-205ENST00000466780 GPR18Q14330 331 aa11.78□□□□□ -0.52
PDZRN3-205ENST00000466780 ZNHIT3Q15649 155 aaPredicted RBP11.78□□□□□ -0.52
PDZRN3-205ENST00000466780 STEAP1BQ6NZ63 245 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms