RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 C1orf21Q9H246 121 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 MUC13Q9H3R2 512 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 ACTR3BQ9P1U1 418 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 MGAT4BQ9UQ53 548 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 TMEM5Q9Y2B1 443 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 TEP1Q99973 2627 aaKnown RBP11.26□□□□□ -0.61
COL5A1-206ENST00000465877 IGHV1-18A0A0C4DH31 117 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 TRBV4-1A0A0J9YWV2 114 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 ZNF503-AS2A6NEH8 195 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 BCL10O95999 233 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 IGHMP01871 453 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 FABP3P05413 133 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 B4GALT1P15291 398 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 CLRN1P58418 232 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 TOP3AQ13472 1001 aaPredicted RBP11.26□□□□□ -0.61
COL5A1-206ENST00000465877 ANKDD1AQ495B1 522 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 IQCCQ4KMZ1 466 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 PODNL1Q6PEZ8 512 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 TBPL2Q6SJ96 375 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 SLC22A25Q6T423 547 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 B3GLCTQ6Y288 498 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 ZNF813Q6ZN06 617 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 ZNF627Q7L945 461 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 LURAP1LQ8IV03 231 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 IGFBPL1Q8WX77 278 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 MCUR1Q96AQ8 359 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 FAM46AQ96IP4 442 aaKnown RBP11.26□□□□□ -0.61
COL5A1-206ENST00000465877 RADILQ96JH8 1075 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 FOXB1Q99853 325 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 TAS2R1Q9NYW7 299 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 GLTPQ9NZD2 209 aa11.26□□□□□ -0.61
COL5A1-206ENST00000465877 STX18Q9P2W9 335 aaKnown RBP11.26□□□□□ -0.61
COL5A1-206ENST00000465877 CRNNQ9UBG3 495 aaPredicted RBP11.26□□□□□ -0.61
COL5A1-206ENST00000465877 TCRBV5S2A0A599 114 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 CENPBD1B2RD01 187 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 CDC42EP2O14613 210 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 SMPD2O60906 423 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 GADD45GO95257 159 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 IGKV3-15P01624 115 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 PAX7P23759 505 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 CAPZA2P47755 286 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 LIMS1P48059 325 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 RUNX1T1Q06455 604 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 FHL1Q13642 323 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 SEC23BQ15437 767 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 ARMC4Q5T2S8 1044 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 TMPRSS11FQ6ZWK6 438 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 RRM2BQ7LG56 351 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 OAFQ86UD1 273 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 MYPOPQ86VE0 399 aaPredicted RBP11.25□□□□□ -0.61
COL5A1-206ENST00000465877 IGFN1Q86VF2 1251 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 CDK20Q8IZL9 346 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 OR4K5Q8NGD3 323 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 OR52J3Q8NH60 311 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 OR51A7Q8NH64 312 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 TMEM171Q8WVE6 324 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 ASB9Q96DX5 294 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 CLPTM1LQ96KA5 538 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 SLC38A2Q96QD8 506 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 ZNF347Q96SE7 839 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 SEPHS2Q99611 448 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 FUZQ9BT04 418 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 TXNIPQ9H3M7 391 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 MOV10Q9HCE1 1003 aaKnown RBP11.25□□□□□ -0.61
COL5A1-206ENST00000465877 IL1RAPQ9NPH3 570 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 KRCC1Q9NPI7 259 aaPredicted RBP11.25□□□□□ -0.61
COL5A1-206ENST00000465877 POU2F3Q9UKI9 436 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 POFUT2Q9Y2G5 429 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 ARID1AO14497 2285 aa11.25□□□□□ -0.61
COL5A1-206ENST00000465877 MED13LQ71F56 2210 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 ATP6V1G2-DDX39BF2Z307 99 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 IGLV1-44P01699 117 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 SOD3P08294 240 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 CECR9P0C854 216 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 DANCRP0C864 163 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 HOXB1P14653 301 aaPredicted RBP11.24□□□□□ -0.61
COL5A1-206ENST00000465877 ACADSP16219 412 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 RRM2P31350 389 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 MAGEA2P43356 314 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 OMPP47874 163 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 IDH3GP51553 393 aaPredicted RBP11.24□□□□□ -0.61
COL5A1-206ENST00000465877 CD47Q08722 323 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 TRIM25Q14258 630 aaKnown RBP11.24□□□□□ -0.61
COL5A1-206ENST00000465877 LAPTM4AQ15012 233 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 TAF11Q15544 211 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 HIST3H3Q16695 136 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 PGGHGQ32M88 737 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 C3orf36Q3SXR2 165 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 DNAL1Q4LDG9 190 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 MDP1Q86V88 176 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 DHFR2Q86XF0 187 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 KRTAP1-3Q8IUG1 177 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 ZDHHC21Q8IVQ6 265 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 LRRC75A-AS1Q8N1F1 130 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 LRRC75AQ8NAA5 344 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 SYT14Q8NB59 555 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 NANOS1Q8WY41 292 aaKnown RBP11.24□□□□□ -0.61
COL5A1-206ENST00000465877 HDAC2Q92769 488 aaKnown RBP11.24□□□□□ -0.61
COL5A1-206ENST00000465877 PERPQ96FX8 193 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 RSRC1Q96IZ7 334 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms