RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 SMLR1H3BR10 107 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 XRCC3O43542 346 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 GMDSO60547 372 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 ICOSLGO75144 302 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 CXCL3P19876 107 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 ZP1P60852 638 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 HNRNPKP61978 463 aaKnown RBP eCLIP11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 FAM166AQ6J272 317 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 TEX261Q6UWH6 196 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 KMT5CQ86Y97 462 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 C10orf53Q8N6V4 93 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 GATSQ8NAP1 163 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 TSTD1Q8NFU3 115 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 OR11H4Q8NGC9 324 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 RNF128Q8TEB7 428 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 DAZLQ92904 295 aaKnown RBP11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 PHF21AQ96BD5 680 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 TGM7Q96PF1 710 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 TSSK2Q96PF2 358 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 TSPAN10Q9H1Z9 355 aaPredicted RBP11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 PNO1Q9NRX1 252 aaKnown RBP11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 SLC23A1Q9UHI7 598 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 ZNF222Q9UK12 451 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 CLEC4AQ9UMR7 237 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 RCE1Q9Y256 329 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 U3KQ87 197 aa11.33□□□□□ -0.6
ECHDC1-209ENST00000454591 ADAMTS20P59510 1910 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 IGLV1-36A0A0B4J1U3 117 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 TUBAL3A6NHL2 446 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 G3V3Q6 166 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 H7C417 338 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 ADAM10O14672 748 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 FADS1O60427 444 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 NDUFB6O95139 128 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 F13BP05160 661 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 SRFP11831 508 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 IFNGR1P15260 489 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 CDK2P24941 298 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 CXCR1P25024 350 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 KIR3DL2P43630 455 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 TAS2R20P59543 309 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 RPL27P61353 136 aaKnown RBP11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 HSD11B2P80365 405 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 CBFBQ13951 182 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 TMEM69Q5SWH9 247 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 ANKRD16Q6P6B7 361 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 GLDNQ6ZMI3 551 aaPredicted RBP11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 MISPQ8IVT2 679 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 C9orf40Q8IXQ3 194 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 D2HGDHQ8N465 521 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 ZNF433Q8N7K0 673 aaPredicted RBP11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 UXS1Q8NBZ7 420 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 PLPP5Q8NEB5 264 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 OR6N2Q8NGY6 317 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 ZNF563Q8TA94 476 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 SLC41A2Q96JW4 573 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 TMPRSS13Q9BYE2 586 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 ZNF436Q9C0F3 470 aaPredicted RBP11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 WWTR1Q9GZV5 400 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 TXNIPQ9H3M7 391 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 SRA1Q9HD15 236 aaKnown RBP11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 TAS2R8Q9NYW2 309 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 MTFP1Q9UDX5 166 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 B9D1Q9UPM9 204 aa11.32□□□□□ -0.6
ECHDC1-209ENST00000454591 C5orf42Q9H799 3197 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 PCDH15Q96QU1 1955 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 PRSS37A4D1T9 235 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 C4orf47A7E2U8 309 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 TNFRSF10AO00220 468 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 ICMTO60725 284 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 SERPINI2O75830 405 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 SLC22A5O76082 557 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 OR2A4O95047 310 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 HPXP02790 462 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 MELTFP08582 738 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 GP1BBP13224 206 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 FSTP19883 344 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 IL12BP29460 328 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 GRPRP30550 384 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 OR3A3P47888 321 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 CCR4P51679 360 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 POLR2HP52434 150 aaKnown RBP11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 NXPH1P58417 271 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 SNRPD2P62316 118 aaKnown RBP11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 ZP4Q12836 540 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 SLC17A1Q14916 467 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 ESCO2Q56NI9 601 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 TMEM255AQ5JRV8 349 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 PRSS42Q7Z5A4 293 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 ZNF227Q86WZ6 799 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 ZNF679Q8IYX0 411 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 SIX5Q8N196 739 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 PRSS35Q8N3Z0 413 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 ZNF454Q8N9F8 522 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 OR1N1Q8NGS0 311 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 C1orf216Q8TAB5 229 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 TSLPQ969D9 159 aa11.31□□□□□ -0.6
ECHDC1-209ENST00000454591 ORAI1Q96D31 301 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms