RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 ARMCX1Q9P291 453 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 RAB22AQ9UL26 194 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 SAMD4AQ9UPU9 718 aaKnown RBP4.53□□□□□ -1.68
EPHA3-202ENST00000452448 DUSP10Q9Y6W6 482 aa4.53□□□□□ -1.68
EPHA3-202ENST00000452448 THSD7BQ9C0I4 1608 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 PNMA8CA0A1B0GUJ8 204 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 RNASEK-C17orf49H0YIS7 233 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 MYL12BO14950 172 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 FABP7O15540 132 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 PDE6DO43924 150 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 SLC19A2O60779 497 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 OR2F2O95006 317 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 OR4F21O95013 312 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 GABARAPO95166 117 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 GJB5O95377 273 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 MT-ND1P03886 318 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 FAM157BP0CG42 384 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 PPIAL4GP0DN37 164 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 LIPCP11150 499 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 RCC1P18754 421 aaPredicted RBP4.52□□□□□ -1.69
EPHA3-202ENST00000452448 MYL12AP19105 171 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 EDN2P20800 178 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 DUSP1P28562 367 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 SOX18P35713 384 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 TIRAPP58753 221 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 RBBP7Q16576 425 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 UGCGQ16739 394 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 ELFN2Q5R3F8 820 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 HENMT1Q5T8I9 393 aaKnown RBP4.52□□□□□ -1.69
EPHA3-202ENST00000452448 SYPL2Q5VXT5 272 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 OR4F3Q6IEY1 312 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 STEAP1BQ6NZ63 245 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 PODNL1Q6PEZ8 512 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 ESPNLQ6ZVH7 1005 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 TMEM179Q6ZVK1 233 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 TCF24Q7RTU0 167 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 DNERQ8NFT8 737 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 OR2AP1Q8NGE2 309 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 ARRDC2Q8TBH0 407 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 ADAMTS17Q8TE56 1095 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 HIST1H2BAQ96A08 127 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 MSTO1Q9BUK6 570 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 TKTL2Q9H0I9 626 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 APMAPQ9HDC9 416 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 SPG21Q9NZD8 308 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 B3GAT1Q9P2W7 334 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 STEAP1Q9UHE8 339 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 OSGIN1Q9UJX0 560 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 EXOSC1Q9Y3B2 195 aaKnown RBP4.52□□□□□ -1.69
EPHA3-202ENST00000452448 UFC1Q9Y3C8 167 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 MAST2Q6P0Q8 1798 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 CACNA1SQ13698 1873 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 A0A1B0GW55 424 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 IFITM10A6NMD0 228 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 ZNF726A6NNF4 738 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 COLCA2A8K830 154 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 MFSD11O43934 449 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 RAD51DO75771 328 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 YIF1AO95070 293 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 CD3EP07766 207 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 DUX4L2P0CJ85 424 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 DUX4L3P0CJ86 424 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 DUX4L4P0CJ87 422 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 DUX4L5P0CJ88 424 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 DUX4L6P0CJ89 424 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 DUX4L7P0CJ90 424 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 C1GALT1C1LP0DN25 315 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 ZNF28P17035 718 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 ENGP17813 658 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 ELAVL4P26378 380 aaKnown RBP4.52□□□□□ -1.69
EPHA3-202ENST00000452448 CHRNB4P30926 498 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 GYG1P46976 350 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 SLC6A11P48066 632 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 GABRA4P48169 554 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 RFX3P48380 749 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 GLUD2P49448 558 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 ARL4DP49703 201 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 KLK7P49862 253 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 SMCPP49901 116 aaPredicted RBP4.52□□□□□ -1.69
EPHA3-202ENST00000452448 RAB28P51157 221 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 ART1P52961 327 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 RPL7AP62424 266 aaKnown RBP4.52□□□□□ -1.69
EPHA3-202ENST00000452448 MS4A2Q01362 244 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 FPGSQ05932 587 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 ELAVL3Q14576 367 aaKnown RBP4.52□□□□□ -1.69
EPHA3-202ENST00000452448 SRSF7Q16629 238 aaKnown RBP eCLIP4.52□□□□□ -1.69
EPHA3-202ENST00000452448 ANKRD55Q3KP44 614 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 COL5A1-AS1Q5SY13 56 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 ZNF770Q6IQ21 691 aaPredicted RBP4.52□□□□□ -1.69
EPHA3-202ENST00000452448 PTAR1Q7Z6K3 402 aaPredicted RBP4.52□□□□□ -1.69
EPHA3-202ENST00000452448 LRRC75A-AS1Q8N1F1 130 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 SLC44A3Q8N4M1 653 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 TEX26Q8N6G2 289 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 CYB5D2Q8WUJ1 264 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 XAGE5Q8WWM1 108 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 SORCS1Q8WY21 1168 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 RERGQ96A58 199 aaPredicted RBP4.52□□□□□ -1.69
EPHA3-202ENST00000452448 SCNM1Q9BWG6 230 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 TPSD1Q9BZJ3 242 aa4.52□□□□□ -1.69
EPHA3-202ENST00000452448 CDIP1Q9H305 208 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms