RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 MELKQ14680 651 aa17.93■□□□□ 0.46
SDC1-205ENST00000447124 GSG1Q2KHT4 349 aa17.93■□□□□ 0.46
SDC1-205ENST00000447124 SKA3Q8IX90 412 aa17.93■□□□□ 0.46
SDC1-205ENST00000447124 SVOPLQ8N434 492 aa17.93■□□□□ 0.46
SDC1-205ENST00000447124 RASSF5Q8WWW0 418 aa17.93■□□□□ 0.46
SDC1-205ENST00000447124 MALRD1Q5VYJ5 2156 aa17.92■□□□□ 0.46
SDC1-205ENST00000447124 hCG_2039718K7EN88 272 aa17.92■□□□□ 0.46
SDC1-205ENST00000447124 RNF13O43567 381 aa17.92■□□□□ 0.46
SDC1-205ENST00000447124 VIMP08670 466 aaKnown RBP17.92■□□□□ 0.46
SDC1-205ENST00000447124 IGHV4-31P0DP07 118 aa17.92■□□□□ 0.46
SDC1-205ENST00000447124 OR1E2P47887 323 aa17.92■□□□□ 0.46
SDC1-205ENST00000447124 PPOXP50336 477 aa17.92■□□□□ 0.46
SDC1-205ENST00000447124 UGT2B15P54855 530 aa17.92■□□□□ 0.46
SDC1-205ENST00000447124 RAB1AP62820 205 aa17.92■□□□□ 0.46
SDC1-205ENST00000447124 GUCY1A3Q02108 690 aa17.92■□□□□ 0.46
SDC1-205ENST00000447124 RUNX1T1Q06455 604 aa17.92■□□□□ 0.46
SDC1-205ENST00000447124 PIN1Q13526 163 aaPredicted RBP17.92■□□□□ 0.46
SDC1-205ENST00000447124 DAG1Q14118 895 aa17.92■□□□□ 0.46
SDC1-205ENST00000447124 C6orf52Q5T4I8 152 aa17.92■□□□□ 0.46
SDC1-205ENST00000447124 KRT80Q6KB66 452 aa17.92■□□□□ 0.46
SDC1-205ENST00000447124 SPATA21Q7Z572 469 aa17.92■□□□□ 0.46
SDC1-205ENST00000447124 PFN4Q8NHR9 129 aa17.92■□□□□ 0.46
SDC1-205ENST00000447124 GMPR2Q9P2T1 348 aaKnown RBP17.92■□□□□ 0.46
SDC1-205ENST00000447124 RIMS3Q9UJD0 308 aa17.92■□□□□ 0.46
SDC1-205ENST00000447124 FKBP7Q9Y680 259 aa17.92■□□□□ 0.46
SDC1-205ENST00000447124 BBIP1A8MTZ0 92 aa17.91■□□□□ 0.46
SDC1-205ENST00000447124 HIST1H2ABP04908 130 aa17.91■□□□□ 0.46
SDC1-205ENST00000447124 FUT1P19526 365 aa17.91■□□□□ 0.46
SDC1-205ENST00000447124 KDELR2P33947 212 aa17.91■□□□□ 0.46
SDC1-205ENST00000447124 NR4A2P43354 598 aa17.91■□□□□ 0.46
SDC1-205ENST00000447124 GIPRP48546 466 aa17.91■□□□□ 0.46
SDC1-205ENST00000447124 LSM11P83369 360 aaKnown RBP eCLIP17.91■□□□□ 0.46
SDC1-205ENST00000447124 SNTB2Q13425 540 aaKnown RBP17.91■□□□□ 0.46
SDC1-205ENST00000447124 ERICH5Q6P6B1 374 aa17.91■□□□□ 0.46
SDC1-205ENST00000447124 HIST3H2AQ7L7L0 130 aa17.91■□□□□ 0.46
SDC1-205ENST00000447124 TMEM255BQ8WV15 326 aa17.91■□□□□ 0.46
SDC1-205ENST00000447124 HIST1H2ACQ93077 130 aa17.91■□□□□ 0.46
SDC1-205ENST00000447124 SLC25A44Q96H78 314 aaPredicted RBP17.91■□□□□ 0.46
SDC1-205ENST00000447124 C20orf141Q9NUB4 165 aa17.91■□□□□ 0.46
SDC1-205ENST00000447124 BAG5Q9UL15 447 aa17.91■□□□□ 0.46
SDC1-205ENST00000447124 SH3PXD2BA1X283 911 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 VSTM5A8MXK1 200 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 BLOC1S5-TXNDC5H3BN57 136 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 DHHO43323 396 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 OR5F1O95221 314 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 MT-ND1P03886 318 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 PGA4P0DJD7 388 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 PGA3P0DJD8 388 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 UMPSP11172 480 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 FUT4P22083 530 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 PTDSS1P48651 473 aaKnown RBP17.9■□□□□ 0.46
SDC1-205ENST00000447124 RAB39AQ14964 217 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 MAPRE2Q15555 327 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 CYBRD1Q53TN4 286 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 CYB5R2Q6BCY4 276 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 DEF8Q6ZN54 512 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 PIWIL3Q7Z3Z3 882 aaKnown RBP17.9■□□□□ 0.46
SDC1-205ENST00000447124 CDK20Q8IZL9 346 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 ZNF566Q969W8 418 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 MRGBPQ9NV56 204 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 CMTM6Q9NX76 183 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 ARMCX1Q9P291 453 aa17.9■□□□□ 0.46
SDC1-205ENST00000447124 IGHV4-61A0A0C4DH41 118 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 LOC390937A0A1W2PQ73 354 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 FAM220BPB1ANY3 271 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 NDUFS8O00217 210 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 OR7A10O76100 309 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 STAMBPO95630 424 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 BCL10O95999 233 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 F13BP05160 661 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 QDPRP09417 244 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 AQP2P41181 271 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 TAS2R41P59536 307 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 RPL18Q07020 188 aaKnown RBP17.89■□□□□ 0.45
SDC1-205ENST00000447124 GGTLC2Q14390 218 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 CARTPTQ16568 116 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 ZNF584Q8IVC4 421 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 SLC22A24Q8N4F4 322 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 POU5F2Q8N7G0 328 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 PCYOX1LQ8NBM8 494 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 SH3GL3Q99963 347 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 MRPL13Q9BYD1 178 aaKnown RBP17.89■□□□□ 0.45
SDC1-205ENST00000447124 MRPL37Q9BZE1 423 aaKnown RBP17.89■□□□□ 0.45
SDC1-205ENST00000447124 RAB1BQ9H0U4 201 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 CCDC134Q9H6E4 229 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 TMEM38BQ9NVV0 291 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 GID8Q9NWU2 228 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 CMAHPQ9Y471 501 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 CUBNO60494 3623 aa17.89■□□□□ 0.45
SDC1-205ENST00000447124 TSPAN19P0C672 248 aa17.88■□□□□ 0.45
SDC1-205ENST00000447124 RBM34P42696 430 aaKnown RBP17.88■□□□□ 0.45
SDC1-205ENST00000447124 LAPTM4AQ15012 233 aa17.88■□□□□ 0.45
SDC1-205ENST00000447124 FXNQ16595 210 aa17.88■□□□□ 0.45
SDC1-205ENST00000447124 HIST3H3Q16695 136 aa17.88■□□□□ 0.45
SDC1-205ENST00000447124 NANOGNBQ7Z5D8 188 aa17.88■□□□□ 0.45
SDC1-205ENST00000447124 LRP11Q86VZ4 500 aa17.88■□□□□ 0.45
SDC1-205ENST00000447124 MICU2Q8IYU8 434 aa17.88■□□□□ 0.45
SDC1-205ENST00000447124 MOSPD2Q8NHP6 518 aa17.88■□□□□ 0.45
SDC1-205ENST00000447124 TMEM239Q8WW34 195 aa17.88■□□□□ 0.45
SDC1-205ENST00000447124 LIPHQ8WWY8 451 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms