RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	MCUR1	Q96AQ8	359 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	C1orf159	Q96HA4	380 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SAMD8	Q96LT4	415 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ABHD1	Q96SE0	405 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	NAA11	Q9BSU3	229 aa	Predicted RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	HES7	Q9BYE0	225 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	BCL2L14	Q9BZR8	327 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	PKIB	Q9C010	78 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	RACGAP1	Q9H0H5	632 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SLC38A1	Q9H2H9	487 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	LDAH	Q9H6V9	325 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	PTGES2	Q9H7Z7	377 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	MARCH7	Q9H992	704 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	BCL2L10	Q9HD36	194 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SEPSECS	Q9HD40	501 aa	Known RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	PNPLA3	Q9NST1	481 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	MAN2C1	Q9NTJ4	1040 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	FLRT3	Q9NZU0	649 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ERVK-18	Q9QC07	812 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	PEF1	Q9UBV8	284 aa	Known RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SEC14L3	Q9UDX4	400 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	DKKL1	Q9UK85	242 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	PRPF19	Q9UMS4	504 aa	Known RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	PLA2G2D	Q9UNK4	145 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SLC35A3	Q9Y2D2	325 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	MRPS7	Q9Y2R9	242 aa	Known RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	STRAP	Q9Y3F4	350 aa	Known RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	WIF1	Q9Y5W5	379 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	NCOR2	Q9Y618	2525 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	MED13	Q9UHV7	2174 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	CACNA1A	O00555	2505 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	WDR87	Q6ZQQ6	2873 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638		A0A0A6YYH2	397 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	DPPA5	A6NC42	116 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	HMX3	A6NHT5	357 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	AGAP5	A6NIR3	686 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638		A6NJ64	397 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	FAM166B	A8MTA8	275 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	NME4	O00746	187 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	LDLRAD4	O15165	306 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ZNF264	O43296	627 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	EIF4E2	O60573	245 aa	Known RBP	5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	MITF	O75030	526 aa	Predicted RBP	5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	UGT2B17	O75795	530 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	TRAPPC6A	O75865	159 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	CH25H	O95992	272 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SCG5	P05408	212 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	CD3G	P09693	182 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	T-ENOL	P0DO92	83 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ETS2	P15036	469 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	CCNO	P22674	350 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	GDF1	P27539	372 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	AQP1	P29972	269 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	GSK3B	P49841	420 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	NPY4R	P50391	375 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	P2RX1	P51575	399 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	RIDA	P52758	137 aa	Known RBP	5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	NKX2-5	P52952	324 aa	Predicted RBP	5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SUMO3	P55854	103 aa	Predicted RBP	5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	RPS3A	P61247	264 aa	Known RBP	5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	NCALD	P61601	193 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	FUT5	Q11128	374 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	BNIP2	Q12982	314 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	DCTN2	Q13561	401 aa	Known RBP	5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	VEZF1	Q14119	521 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	FGFBP1	Q14512	234 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SLC10A1	Q14973	349 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ETFDH	Q16134	617 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	HIKESHI	Q53FT3	197 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	EIPR1	Q53HC9	387 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	COLEC12	Q5KU26	742 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	TIGD3	Q6B0B8	471 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	C8orf82	Q6P1X6	216 aa	Predicted RBP	5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	EIF3M	Q7L2H7	374 aa	Known RBP	5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ZNF550	Q7Z398	422 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	HMGN2P46	Q86SG4	172 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	PTOV1	Q86YD1	416 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ZNF440	Q8IYI8	595 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ZNF786	Q8N393	782 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	CISD2	Q8N5K1	135 aa	Known RBP	5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ZFP62	Q8NB50	900 aa	Predicted RBP	5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ZNF563	Q8TA94	476 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	RNASE11	Q8TAA1	199 aa	Known RBP	5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ZNF596	Q8TC21	504 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	DUSP19	Q8WTR2	217 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	FIG4	Q92562	907 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SH3YL1	Q96HL8	342 aa	Predicted RBP	5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ZNF48	Q96MX3	618 aa	Predicted RBP	5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ZNF583	Q96ND8	569 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SSX3	Q99909	188 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	BTBD10	Q9BSF8	475 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	PIMREG	Q9BSJ6	248 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	THTPA	Q9BU02	230 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	GON7	Q9BXV9	100 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	PARD6G	Q9BYG4	376 aa	Predicted RBP	5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	TTTY12	Q9BZ98	90 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	OPN3	Q9H1Y3	402 aa	Predicted RBP	5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	MMP27	Q9H306	513 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	DSN1	Q9H410	356 aa		5.57	□□□□□ -1.52
ECHDC1-208	ENST00000436638	GALNT9	Q9HCQ5	603 aa		5.57	□□□□□ -1.52

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