RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 RFX2P48378 723 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 ZP4Q12836 540 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 HSD17B12Q53GQ0 312 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 PHF19Q5T6S3 580 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 AGAP6Q5VW22 663 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 ZNF544Q6NX49 715 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 MRPL14Q6P1L8 145 aaKnown RBP9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 ZNF517Q6ZMY9 492 aaPredicted RBP9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 NRARPQ7Z6K4 114 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 NR2C2APQ86WQ0 139 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 SCAIQ8N9R8 606 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 IL17RDQ8NFM7 739 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 ZNF519Q8TB69 540 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 SMAP2Q8WU79 429 aaPredicted RBP9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 HPS1Q92902 700 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 ZC3HAV1LQ96H79 300 aaKnown RBP9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 AGAP4Q96P64 663 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 INTS14Q96SY0 518 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 KLHDC3Q9BQ90 382 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 MRI1Q9BV20 369 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 SRA1Q9HD15 236 aaKnown RBP9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 VSX1Q9NZR4 365 aaPredicted RBP9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 EXTL2Q9UBQ6 330 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 CPAMD8Q8IZJ3 1885 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 PCNX2A6NKB5 2137 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 PRSS37A4D1T9 235 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 A6NIZ1 184 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 CENPBD1B2RD01 187 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 D6RAR5 112 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 MEN1O00255 615 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 PLPP3O14495 311 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 DVL2O14641 736 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 ARHGEF9O43307 516 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 ITGA10O75578 1167 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 SYPP08247 313 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 CEACAM1P13688 526 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 ELK1P19419 428 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 CSRP1P21291 193 aaKnown RBP9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 CCKBRP32239 447 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 NR4A2P43354 598 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 INPP1P49441 399 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 FBXW4P57775 412 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 OR2B6P58173 313 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 RAP1BP61224 184 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 RPS11P62280 158 aaKnown RBP eCLIP9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 RAP1AP62834 184 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 SLC25A53Q5H9E4 307 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 FAM205BPQ63HN1 556 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 SLC23A3Q6PIS1 610 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 POMZP3Q6PJE2 187 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 RDH10Q8IZV5 341 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 GHDCQ8N2G8 530 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 ZNF511Q8NB15 262 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 AGBL5Q8NDL9 886 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 ZNF248Q8NDW4 579 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 NLGN4YQ8NFZ3 816 aaPredicted RBP9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 MFSD8Q8NHS3 518 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 ASB17Q8WXJ9 295 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 SLC25A36Q96CQ1 311 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 DDIT4LQ96D03 193 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 KCNJ15Q99712 375 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 POTEKPQ9BYX7 375 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 TTTY10Q9BZA0 68 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 PPIL3Q9H2H8 161 aaKnown RBP9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 GPN3Q9UHW5 284 aaPredicted RBP9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 LAMP5Q9UJQ1 280 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 RASD1Q9Y272 281 aa9.46□□□□□ -0.9
POLR2J3-201ENST00000379340 SEC16AO15027 2179 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 APC2O95996 2303 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 LOC102723996A0A087X1L8 192 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 FTCDNL1E5RQL4 147 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 GMFGO60234 142 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 FZD7O75084 574 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 CRABP1P29762 137 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 CASP3P42574 277 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 MAP2K3P46734 347 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 EIF2B2P49770 351 aaKnown RBP9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 DBPQ10586 325 aaPredicted RBP9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 ALKBH1Q13686 389 aaKnown RBP9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 TAB1Q15750 504 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 ACKR1Q16570 336 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 FAM27D1Q5T7N8 215 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 PYHIN1Q6K0P9 492 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 DNM1P34Q6PK57 102 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 UBQLNLQ8IYU4 475 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 OR6V1Q8N148 313 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 CELF2-AS1Q8N7Q2 184 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 YIPF7Q8N8F6 280 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 SAMD12Q8N8I0 201 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 ZBTB8BQ8NAP8 495 aaPredicted RBP9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 OR6N2Q8NGY6 317 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 TRMT10AQ8TBZ6 339 aaKnown RBP9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 ENKURQ8TC29 256 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 MRGPRX4Q96LA9 322 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 C11orf54Q9H0W9 315 aaPredicted RBP9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 SYT4Q9H2B2 425 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 TMEM9BQ9NQ34 198 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 OCIAD1Q9NX40 245 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 KLRF1Q9NZS2 232 aa9.45□□□□□ -0.9
POLR2J3-201ENST00000379340 PPP4R1LQ9P1A2 415 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms