RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 OMPP47874 163 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 EVX1P49640 407 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 RPS26P62854 115 aaKnown RBP9.36□□□□□ -0.91
COL5A1-202ENST00000371820 PITPNAQ00169 270 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 EFR3AQ14156 821 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 LASP1Q14847 261 aaKnown RBP9.36□□□□□ -0.91
COL5A1-202ENST00000371820 CDK10Q15131 360 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 LTB4RQ15722 352 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 TRMT12Q53H54 448 aaKnown RBP9.36□□□□□ -0.91
COL5A1-202ENST00000371820 C22orf42Q6IC83 251 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 ZNF585AQ6P3V2 769 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 C3P1Q6ZMU1 363 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 MEPCEQ7L2J0 689 aaKnown RBP9.36□□□□□ -0.91
COL5A1-202ENST00000371820 NRARPQ7Z6K4 114 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 PRR22Q8IZ63 422 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 TCTE3Q8IZS6 198 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 ACBD7Q8N6N7 88 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 ASCC1Q8N9N2 400 aaKnown RBP9.36□□□□□ -0.91
COL5A1-202ENST00000371820 OR4D11Q8NGI4 311 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 OR9A2Q8NGT5 310 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 DNAJA4Q8WW22 397 aaPredicted RBP9.36□□□□□ -0.91
COL5A1-202ENST00000371820 CAPSLQ8WWF8 208 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 OIT3Q8WWZ8 545 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 SLC41A3Q96GZ6 507 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 STACQ99469 402 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 SOSTQ9BQB4 213 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 C7orf50Q9BRJ6 194 aaKnown RBP9.36□□□□□ -0.91
COL5A1-202ENST00000371820 MRI1Q9BV20 369 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 BARHL1Q9BZE3 327 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 SLC38A1Q9H2H9 487 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 PIGUQ9H490 435 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 RNF167Q9H6Y7 350 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 NIPAL2Q9H841 368 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 PROK2Q9HC23 129 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 ZNF275Q9NSD4 429 aaPredicted RBP9.36□□□□□ -0.91
COL5A1-202ENST00000371820 RBFOX1Q9NWB1 397 aaKnown RBP9.36□□□□□ -0.91
COL5A1-202ENST00000371820 BABAM2Q9NXR7 383 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 PTTG3PQ9NZH4 202 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 KLRF1Q9NZS2 232 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 COPZ2Q9P299 210 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 TBC1D24Q9ULP9 559 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 N6AMT1Q9Y5N5 214 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 LIPGQ9Y5X9 500 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 C2CD3Q4AC94 2353 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 CELSR1Q9NYQ6 3014 aa9.36□□□□□ -0.91
COL5A1-202ENST00000371820 FAM240BA0A1B0GVZ2 78 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 OR6C70A6NIJ9 312 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 LRRC3CA6NJW4 275 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 M0R3H8 397 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 ZNHIT1O43257 154 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 TRAPPC6AO75865 159 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 TACC2O95359 2948 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 DHFRP00374 187 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 IFNGP01579 166 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 CD1AP06126 327 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 SSTR2P30874 369 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 MAP2K3P46734 347 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 EMDP50402 254 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 GAS1P54826 345 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 RIPPLY3P57055 190 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 ACTC1P68032 377 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 ACTA1P68133 377 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 DUSP2Q05923 314 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 TOMM20Q15388 145 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 ZNHIT3Q15649 155 aaPredicted RBP9.35□□□□□ -0.91
COL5A1-202ENST00000371820 NNATQ16517 81 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 PGGHGQ32M88 737 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 C1orf185Q5T7R7 199 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 FAM180BQ6P0A1 224 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 LRRC28Q86X40 367 aaPredicted RBP9.35□□□□□ -0.91
COL5A1-202ENST00000371820 RBM45Q8IUH3 476 aaKnown RBP9.35□□□□□ -0.91
COL5A1-202ENST00000371820 PM20D2Q8IYS1 436 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 CDRT4Q8N9R6 151 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 ACBD4Q8NC06 268 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 OR5M9Q8NGP3 310 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 OR1J4Q8NGS1 313 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 NEIL3Q8TAT5 605 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 GATAD2BQ8WXI9 593 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 C14orf79Q96F83 325 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 SLC35A4Q96G79 324 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 ZNF559Q9BR84 538 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 KATNB1Q9BVA0 655 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 TPK1Q9H3S4 243 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 SERHL2Q9H4I8 314 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 TMEM27Q9HBJ8 222 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 TRIM36Q9NQ86 728 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 DUSP22Q9NRW4 184 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 MRTO4Q9UKD2 239 aaKnown RBP9.35□□□□□ -0.91
COL5A1-202ENST00000371820 POU2F3Q9UKI9 436 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 GPR55Q9Y2T6 319 aaPredicted RBP9.35□□□□□ -0.91
COL5A1-202ENST00000371820 WDR45Q9Y484 360 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 OR10H1Q9Y4A9 318 aa9.35□□□□□ -0.91
COL5A1-202ENST00000371820 GTF3C1Q12789 2109 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 A0A1W2PQ09 198 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 PRAMEF27A3QJZ7 478 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 UNC119BA6NIH7 251 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 AHRRA9YTQ3 701 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 REM1O75628 298 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 RGS9O75916 674 aaPredicted RBP9.34□□□□□ -0.91
COL5A1-202ENST00000371820 MT-ND5P03915 603 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 929.1 ms