RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 ARF1P84077 181 aaKnown RBP16.2■□□□□ 0.18
CHTOP-202ENST00000368687 DEFB113Q30KQ7 82 aa16.2■□□□□ 0.18
CHTOP-202ENST00000368687 NRN1LQ496H8 165 aa16.2■□□□□ 0.18
CHTOP-202ENST00000368687 ZNF672Q499Z4 452 aaPredicted RBP16.2■□□□□ 0.18
CHTOP-202ENST00000368687 HIKESHIQ53FT3 197 aa16.2■□□□□ 0.18
CHTOP-202ENST00000368687 SPNS3Q6ZMD2 512 aa16.2■□□□□ 0.18
CHTOP-202ENST00000368687 PIWIL3Q7Z3Z3 882 aaKnown RBP16.2■□□□□ 0.18
CHTOP-202ENST00000368687 TSEN54Q7Z6J9 526 aaKnown RBP16.2■□□□□ 0.18
CHTOP-202ENST00000368687 AKAP1Q92667 903 aaKnown RBP eCLIP16.2■□□□□ 0.18
CHTOP-202ENST00000368687 TMEM54Q969K7 222 aa16.2■□□□□ 0.18
CHTOP-202ENST00000368687 LRGUKQ96M69 825 aa16.2■□□□□ 0.18
CHTOP-202ENST00000368687 CXXC4Q9H2H0 198 aa16.2■□□□□ 0.18
CHTOP-202ENST00000368687 TXNIPQ9H3M7 391 aa16.2■□□□□ 0.18
CHTOP-202ENST00000368687 DENND2DQ9H6A0 471 aaPredicted RBP16.2■□□□□ 0.18
CHTOP-202ENST00000368687 FBXL3Q9UKT7 428 aa16.2■□□□□ 0.18
CHTOP-202ENST00000368687 M0R1B8 84 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 UBOX5O94941 541 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 GADD45GO95257 159 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 IGHMP01871 453 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 F13BP05160 661 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 PGA4P0DJD7 388 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 PGA3P0DJD8 388 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 SPIBQ01892 262 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 TRAP1Q12931 704 aaKnown RBP16.19■□□□□ 0.18
CHTOP-202ENST00000368687 PODNL1Q6PEZ8 512 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 DPPA2Q7Z7J5 298 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 ZDHHC21Q8IVQ6 265 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 NOXO1Q8NFA2 376 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 ASB10Q8WXI3 467 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 SEPHS2Q99611 448 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 FOXB1Q99853 325 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 KCNS3Q9BQ31 491 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 CXorf56Q9H5V9 222 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 SMURF2Q9HAU4 748 aa16.19■□□□□ 0.18
CHTOP-202ENST00000368687 CRNNQ9UBG3 495 aaPredicted RBP16.19■□□□□ 0.18
CHTOP-202ENST00000368687 A6NIZ1 184 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 ATP5HO75947 161 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 ACADSP16219 412 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 MAKP20794 623 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 ARR3P36575 388 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 RAP1BP61224 184 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 RAP1AP62834 184 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 MELKQ14680 651 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 IQCCQ4KMZ1 466 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 FAM98BQ52LJ0 330 aaKnown RBP16.18■□□□□ 0.18
CHTOP-202ENST00000368687 SLC22A25Q6T423 547 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 CYP2R1Q6VVX0 501 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 ZNF813Q6ZN06 617 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 LRRC75A-AS1Q8N1F1 130 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 LINC00471Q8N535 108 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 OR4K5Q8NGD3 323 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 TMEM171Q8WVE6 324 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 SLC38A2Q96QD8 506 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 THTPAQ9BU02 230 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 ALG12Q9BV10 488 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 KATNB1Q9BVA0 655 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 POU2F3Q9UKI9 436 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 TMCC3Q9ULS5 477 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 AURKCQ9UQB9 309 aa16.18■□□□□ 0.18
CHTOP-202ENST00000368687 A0A096LPE4 126 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 A0A1W2PPZ6 126 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 A0A1W2PR80 420 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 PDE5AO76074 875 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 FARS2O95363 451 aaKnown RBP16.17■□□□□ 0.18
CHTOP-202ENST00000368687 IGKV3-15P01624 115 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 ATP6V1B2P21281 511 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 MAGEA2P43356 314 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 GPR4P46093 362 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 ZNF84P51523 738 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 CDH11P55287 796 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 RPL27P61353 136 aaKnown RBP16.17■□□□□ 0.18
CHTOP-202ENST00000368687 CHRNB3Q05901 458 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 GK3PQ14409 553 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 HIST3H3Q16695 136 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 ZBED5Q49AG3 693 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 ARMC4Q5T2S8 1044 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 IL17RDQ8NFM7 739 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 MOSPD2Q8NHP6 518 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 CCDC124Q96CT7 223 aaKnown RBP16.17■□□□□ 0.18
CHTOP-202ENST00000368687 BTBD10Q9BSF8 475 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 MRPL13Q9BYD1 178 aaKnown RBP16.17■□□□□ 0.18
CHTOP-202ENST00000368687 NELFAQ9H3P2 528 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 ARID1AO14497 2285 aa16.17■□□□□ 0.18
CHTOP-202ENST00000368687 PRRC2AP48634 2157 aaKnown RBP16.16■□□□□ 0.18
CHTOP-202ENST00000368687 TRAV27A0A087WT01 109 aa16.16■□□□□ 0.18
CHTOP-202ENST00000368687 TRBV4-1A0A0J9YWV2 114 aa16.16■□□□□ 0.18
CHTOP-202ENST00000368687 SH3PXD2BA1X283 911 aa16.16■□□□□ 0.18
CHTOP-202ENST00000368687 SHISA9B4DS77 424 aa16.16■□□□□ 0.18
CHTOP-202ENST00000368687 DHHO43323 396 aa16.16■□□□□ 0.18
CHTOP-202ENST00000368687 AHCYL1O43865 530 aa16.16■□□□□ 0.18
CHTOP-202ENST00000368687 SMPD2O60906 423 aa16.16■□□□□ 0.18
CHTOP-202ENST00000368687 UBL3O95164 117 aa16.16■□□□□ 0.18
CHTOP-202ENST00000368687 PLAUP00749 431 aa16.16■□□□□ 0.18
CHTOP-202ENST00000368687 CRYAAP02489 173 aa16.16■□□□□ 0.18
CHTOP-202ENST00000368687 CBR1P16152 277 aa16.16■□□□□ 0.18
CHTOP-202ENST00000368687 RPL4P36578 427 aaKnown RBP16.16■□□□□ 0.18
CHTOP-202ENST00000368687 OMPP47874 163 aa16.16■□□□□ 0.18
CHTOP-202ENST00000368687 LIMS1P48059 325 aa16.16■□□□□ 0.18
CHTOP-202ENST00000368687 LAPTM4AQ15012 233 aa16.16■□□□□ 0.18
CHTOP-202ENST00000368687 PHYHD1Q5SRE7 291 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms