RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 TTC3P53804 2025 aa6.09□□□□□ -1.44
ZNF540-201ENST00000316433 YLPM1P49750 1951 aaKnown RBP6.08□□□□□ -1.44
ZNF540-201ENST00000316433 A0A0D9SEW6 157 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 AHRRA9YTQ3 701 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 H7C417 338 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 K7EP13 123 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 COCHO43405 550 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 B4GALT3O60512 393 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 RPP14O95059 124 aaKnown RBP6.08□□□□□ -1.44
ZNF540-201ENST00000316433 ERCC1P07992 297 aaPredicted RBP6.08□□□□□ -1.44
ZNF540-201ENST00000316433 TYRP1P17643 537 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 EPHA1P21709 976 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 CD82P27701 267 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 SERPINA4P29622 427 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 CAV2P51636 162 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 RAP1BP61224 184 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 EIF5AP63241 154 aaKnown RBP6.08□□□□□ -1.44
ZNF540-201ENST00000316433 HMGN3Q15651 99 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 HENMT1Q5T8I9 393 aaKnown RBP6.08□□□□□ -1.44
ZNF540-201ENST00000316433 CPTPQ5TA50 214 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 NXPE4Q6UWF7 544 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 CEACAM20Q6UY09 585 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 HEPN1Q6WQI6 88 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 SSX7Q7RTT5 188 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 TAF8Q7Z7C8 310 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF610Q8N9Z0 462 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 OR4F15Q8NGB8 312 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 OR52N4Q8NGI2 321 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 OR2A12Q8NGT7 310 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 OR10R2Q8NGX6 335 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 OR4C6Q8NH72 309 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 M1APQ8TC57 530 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 SLC2A12Q8TD20 617 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 HAVCR2Q8TDQ0 301 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 RNF141Q8WVD5 230 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 SMIM4Q8WVI0 70 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 HMGB4Q8WW32 186 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 BOD1Q96IK1 185 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 ADGRG7Q96K78 797 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 SGCZQ96LD1 299 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 IP6K3Q96PC2 410 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 COPS8Q99627 209 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 WRAP53Q9BUR4 548 aaKnown RBP6.08□□□□□ -1.44
ZNF540-201ENST00000316433 DPEP2Q9H4A9 486 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 AUNIPQ9H7T9 357 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 PLEKHA1Q9HB21 404 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 LANCL2Q9NS86 450 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 RASD1Q9Y272 281 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 MAP4K5Q9Y4K4 846 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 MTCH2Q9Y6C9 303 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 PRSS21Q9Y6M0 314 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 A0A0G2JN53 185 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 GSAPA4D1B5 854 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 DVL1O14640 695 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 MAGEB4O15481 346 aaPredicted RBP6.08□□□□□ -1.44
ZNF540-201ENST00000316433 RGS9O75916 674 aaPredicted RBP6.08□□□□□ -1.44
ZNF540-201ENST00000316433 KLKB1P03952 638 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 UCHL1P09936 223 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 HKR1P10072 659 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 GZMBP10144 247 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 ACP2P11117 423 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 NDUFV2P19404 249 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 TBPP20226 339 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 TLX1P31314 330 aaPredicted RBP6.08□□□□□ -1.44
ZNF540-201ENST00000316433 SPINT3P49223 89 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 CDC34P49427 236 aaPredicted RBP6.08□□□□□ -1.44
ZNF540-201ENST00000316433 CDKN1CP49918 316 aaPredicted RBP6.08□□□□□ -1.44
ZNF540-201ENST00000316433 PCBP4P57723 403 aaKnown RBP6.08□□□□□ -1.44
ZNF540-201ENST00000316433 TMEM115Q12893 351 aaPredicted RBP6.08□□□□□ -1.44
ZNF540-201ENST00000316433 TEAD2Q15562 447 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 HAGHQ16775 308 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 CTXN3Q4LDR2 81 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 MFSD14CQ5VZR4 134 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 DNM1P46Q6ZS02 220 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 P4HA3Q7Z4N8 544 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 BCDIN3DQ7Z5W3 292 aaKnown RBP6.08□□□□□ -1.44
ZNF540-201ENST00000316433 CTU1Q7Z7A3 348 aaKnown RBP6.08□□□□□ -1.44
ZNF540-201ENST00000316433 MRPL52Q86TS9 123 aaKnown RBP6.08□□□□□ -1.44
ZNF540-201ENST00000316433 THAP3Q8WTV1 239 aaPredicted RBP6.08□□□□□ -1.44
ZNF540-201ENST00000316433 DTD2Q96FN9 168 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 NUDT11Q96G61 164 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 APIPQ96GX9 242 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 SMIM8Q96KF7 97 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF649Q9BS31 505 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 TDP1Q9NUW8 608 aa6.08□□□□□ -1.44
ZNF540-201ENST00000316433 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 PRAMEF25A6NGN4 478 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 MAN2B1O00754 1011 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 ARG1P05089 322 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 ATP1B2P14415 290 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 CD22P20273 847 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 CD52P31358 61 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 SOX18P35713 384 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 TAGLN2P37802 199 aaKnown RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 FEN1P39748 380 aaKnown RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 NKX6-1P78426 367 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 DPTQ07507 201 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 HEPACAMQ14CZ8 416 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF750Q32MQ0 723 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms