RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 ICOSLGO75144 302 aa22.69■■□□□ 1.22
ROM1-201ENST00000278833 CSRP1P21291 193 aaKnown RBP22.69■■□□□ 1.22
ROM1-201ENST00000278833 GRPRP30550 384 aa22.69■■□□□ 1.22
ROM1-201ENST00000278833 MECP2P51608 486 aaKnown RBP22.69■■□□□ 1.22
ROM1-201ENST00000278833 DMWDQ09019 674 aa22.69■■□□□ 1.22
ROM1-201ENST00000278833 ST3GAL2Q16842 350 aa22.69■■□□□ 1.22
ROM1-201ENST00000278833 DND1Q8IYX4 353 aaKnown RBP22.69■■□□□ 1.22
ROM1-201ENST00000278833 OR6V1Q8N148 313 aa22.69■■□□□ 1.22
ROM1-201ENST00000278833 PIAS4Q8N2W9 510 aaPredicted RBP22.69■■□□□ 1.22
ROM1-201ENST00000278833 SPEM1Q8N4L4 309 aa22.69■■□□□ 1.22
ROM1-201ENST00000278833 BMPERQ8N8U9 685 aa22.69■■□□□ 1.22
ROM1-201ENST00000278833 OR2G2Q8NGZ5 317 aa22.69■■□□□ 1.22
ROM1-201ENST00000278833 SNAPC3Q92966 411 aa22.69■■□□□ 1.22
ROM1-201ENST00000278833 RADILQ96JH8 1075 aa22.69■■□□□ 1.22
ROM1-201ENST00000278833 INTS14Q96SY0 518 aa22.69■■□□□ 1.22
ROM1-201ENST00000278833 FKBP7Q9Y680 259 aa22.69■■□□□ 1.22
ROM1-201ENST00000278833 ZNF318Q5VUA4 2279 aa22.69■■□□□ 1.22
ROM1-201ENST00000278833 CPAMD8Q8IZJ3 1885 aa22.69■■□□□ 1.22
ROM1-201ENST00000278833 IGHMP01871 453 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 ADRA2CP18825 462 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 BLVRAP53004 296 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 GPLD1P80108 840 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 CADM4Q8NFZ8 388 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 OR52I2Q8NH67 350 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 FCAMRQ8WWV6 532 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 COMMD4Q9H0A8 199 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 B3GNT2Q9NY97 397 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 OR6C76A6NM76 312 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 FAM171A2A8MVW0 826 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 ACOT7O00154 380 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 AKR7A3O95154 331 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 F13BP05160 661 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 PSMB1P20618 241 aaKnown RBP22.68■■□□□ 1.22
ROM1-201ENST00000278833 ART1P52961 327 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 SGCBQ16585 318 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 RNASE12Q5GAN4 147 aaKnown RBP22.68■■□□□ 1.22
ROM1-201ENST00000278833 OR11G2Q8NGC1 345 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 SYNPRQ8TBG9 265 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 ZNF431Q8TF32 576 aaPredicted RBP22.68■■□□□ 1.22
ROM1-201ENST00000278833 TSLPQ969D9 159 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 MED30Q96HR3 178 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 OR8D2Q9GZM6 311 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 SCP2D1Q9UJQ7 156 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 ELF5Q9UKW6 265 aaPredicted RBP22.68■■□□□ 1.22
ROM1-201ENST00000278833 ZNF346Q9UL40 294 aaKnown RBP22.68■■□□□ 1.22
ROM1-201ENST00000278833 RCE1Q9Y256 329 aa22.68■■□□□ 1.22
ROM1-201ENST00000278833 USP34Q70CQ2 3546 aa22.67■■□□□ 1.22
ROM1-201ENST00000278833 PGCP20142 388 aa22.67■■□□□ 1.22
ROM1-201ENST00000278833 ZNF433Q8N7K0 673 aaPredicted RBP22.67■■□□□ 1.22
ROM1-201ENST00000278833 ZNF441Q8N8Z8 693 aa22.67■■□□□ 1.22
ROM1-201ENST00000278833 DTWD2Q8NBA8 298 aa22.67■■□□□ 1.22
ROM1-201ENST00000278833 ASB17Q8WXJ9 295 aa22.67■■□□□ 1.22
ROM1-201ENST00000278833 C4orf45Q96LM5 186 aa22.67■■□□□ 1.22
ROM1-201ENST00000278833 ADOQ96SZ5 270 aa22.67■■□□□ 1.22
ROM1-201ENST00000278833 IER2Q9BTL4 223 aa22.67■■□□□ 1.22
ROM1-201ENST00000278833 NUDT9Q9BW91 350 aa22.67■■□□□ 1.22
ROM1-201ENST00000278833 ZNF222Q9UK12 451 aa22.67■■□□□ 1.22
ROM1-201ENST00000278833 NPIPB7O75200 414 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 SERPINI2O75830 405 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 TPOP07202 933 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 IL12BP29460 328 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 PNLIPRP2P54317 469 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 HNRNPKP61978 463 aaKnown RBP eCLIP22.66■■□□□ 1.22
ROM1-201ENST00000278833 TMEM69Q5SWH9 247 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 C1QTNF12Q5T7M4 302 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 ZBTB37Q5TC79 503 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 YOD1Q5VVQ6 348 aaPredicted RBP22.66■■□□□ 1.22
ROM1-201ENST00000278833 MAMSTRQ6ZN01 415 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 MAMDC2Q7Z304 686 aaPredicted RBP22.66■■□□□ 1.22
ROM1-201ENST00000278833 IZUMO1Q8IYV9 350 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 FAM160A2Q8N612 972 aaPredicted RBP22.66■■□□□ 1.22
ROM1-201ENST00000278833 OTOSQ8NHW6 89 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 ZNF519Q8TB69 540 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 GPR148Q8TDV2 347 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 DAZLQ92904 295 aaKnown RBP22.66■■□□□ 1.22
ROM1-201ENST00000278833 DCBLD2Q96PD2 775 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 YIPF2Q9BWQ6 316 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 PSMD9O00233 223 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 CXCL3P19876 107 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 CXCR1P25024 350 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 P2RX1P51575 399 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 SNRPD2P62316 118 aaKnown RBP22.66■■□□□ 1.22
ROM1-201ENST00000278833 HSD11B2P80365 405 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 COL28A1Q2UY09 1125 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 METTL11BQ5VVY1 283 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 C5orf46Q6UWT4 87 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 TTLL10Q6ZVT0 673 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 C9orf40Q8IXQ3 194 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 OR6N2Q8NGY6 317 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 RLN3Q8WXF3 142 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 MCHR2Q969V1 340 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 ORAI1Q96D31 301 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 PTDSS2Q9BVG9 487 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 SRA1Q9HD15 236 aaKnown RBP22.66■■□□□ 1.22
ROM1-201ENST00000278833 TAS2R5Q9NYW4 299 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 VSX1Q9NZR4 365 aaPredicted RBP22.66■■□□□ 1.22
ROM1-201ENST00000278833 MGAT4AQ9UM21 535 aa22.66■■□□□ 1.22
ROM1-201ENST00000278833 KMT2EQ8IZD2 1858 aa22.65■■□□□ 1.22
ROM1-201ENST00000278833 RPP14O95059 124 aaKnown RBP22.65■■□□□ 1.22
ROM1-201ENST00000278833 CXCL12P48061 93 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms