RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ITGB7P26010 798 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 ELAVL4P26378 380 aaKnown RBP15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 MEP1BQ16820 701 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 DUSP6Q16828 381 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 ASTLQ6HA08 431 aaPredicted RBP15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 RELL2Q8NC24 303 aaPredicted RBP15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 HRASLS5Q96KN8 279 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 GINS3Q9BRX5 216 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 PPP1R3CQ9UQK1 317 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 LMO7Q8WWI1 1683 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 ARNTLO00327 626 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 ADAM10O14672 748 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 PAX6P26367 422 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 MRPS10P82664 201 aaKnown RBP15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 EXOSC2Q13868 293 aaKnown RBP15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 MSMO1Q15800 293 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 TIPARPQ7Z3E1 657 aaKnown RBP15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 GRAMD2AQ8IUY3 354 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 OR6C1Q96RD1 312 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 ZIC5Q96T25 663 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 EMC6Q9BV81 110 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 NKX6-2Q9C056 277 aaPredicted RBP15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 TAF9BQ9HBM6 251 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 PIGLQ9Y2B2 252 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 SLC45A1Q9Y2W3 748 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 NOSIPQ9Y314 301 aaKnown RBP15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 CHST2Q9Y4C5 530 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 C17orf112F2Z3M2 114 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 DEFA4P12838 97 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 PI3P19957 117 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 BMPR1AP36894 532 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 SLC14A2Q15849 920 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 NLRC3Q7RTR2 1065 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 ZFP62Q8NB50 900 aaPredicted RBP15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 OR52A5Q9H2C5 316 aa15.52■□□□□ 0.08
TSPAN3-201ENST00000267970 MYO18AQ92614 2054 aaKnown RBP15.52■□□□□ 0.07
TSPAN3-201ENST00000267970 CNR1P21554 472 aa15.52■□□□□ 0.07
TSPAN3-201ENST00000267970 HLA-FP30511 346 aa15.52■□□□□ 0.07
TSPAN3-201ENST00000267970 ARL6IP1Q15041 203 aa15.52■□□□□ 0.07
TSPAN3-201ENST00000267970 GLYR1Q49A26 553 aaPredicted RBP15.52■□□□□ 0.07
TSPAN3-201ENST00000267970 CLEC9AQ6UXN8 241 aa15.52■□□□□ 0.07
TSPAN3-201ENST00000267970 DBX2Q6ZNG2 339 aa15.52■□□□□ 0.07
TSPAN3-201ENST00000267970 SLCO5A1Q9H2Y9 848 aa15.52■□□□□ 0.07
TSPAN3-201ENST00000267970 ATP13A2Q9NQ11 1180 aa15.52■□□□□ 0.07
TSPAN3-201ENST00000267970 S100A11P31949 105 aa15.52■□□□□ 0.07
TSPAN3-201ENST00000267970 NAA40Q86UY6 237 aa15.52■□□□□ 0.07
TSPAN3-201ENST00000267970 ZNF583Q96ND8 569 aa15.52■□□□□ 0.07
TSPAN3-201ENST00000267970 SLC2A11Q9BYW1 496 aa15.52■□□□□ 0.07
TSPAN3-201ENST00000267970 CCL26Q9Y258 94 aa15.52■□□□□ 0.07
TSPAN3-201ENST00000267970 OR2C1O95371 312 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 ATXN1LP0C7T5 689 aaKnown RBP15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 TMEM88Q6PEY1 159 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 CORO6Q6QEF8 472 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 MED25Q71SY5 747 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 ZNF534Q76KX8 674 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 SYT13Q7L8C5 426 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 DCXRQ7Z4W1 244 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 OR2G3Q8NGZ4 309 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 NIPSNAP3BQ9BS92 247 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 PRSS44E7EML9 344 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 NXPH2O95156 264 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 KCNK5O95279 499 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 HBMQ6B0K9 141 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 GDF7Q7Z4P5 450 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 WDR83Q9BRX9 315 aaKnown RBP15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 NT5DC2Q9H857 520 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 MYH1P12882 1939 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 MYH4Q9Y623 1939 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 LPLP06858 475 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 ARL16Q0P5N6 197 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 PGAP1Q75T13 922 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 C11orf42Q8N5U0 333 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 FAM71CQ8NEG0 241 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 OR4N2Q8NGD1 307 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 RNF141Q8WVD5 230 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 NXF2Q9GZY0 626 aaKnown RBP15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 RIMBP3CA6NJZ7 1639 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 RIMBP3BA6NNM3 1639 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 RIMBP3Q9UFD9 1639 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 SDK1Q7Z5N4 2213 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 SRMP19623 302 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 RAB35Q15286 201 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 KCTD11Q693B1 232 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 CADM3Q8N126 398 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 KLHDC9Q8NEP7 349 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 DCAF16Q9NXF7 216 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 CICQ96RK0 1608 aaPredicted RBP15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 A0A1B0GTW7 788 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 UTS2O95399 124 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 LAP3P28838 519 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 RUNX2Q13950 521 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 HACD4Q5VWC8 232 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 GLIPR1L1Q6UWM5 242 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 ORAI1Q96D31 301 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 TCTN2Q96GX1 697 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 GPR173Q9NS66 373 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 UFSP2Q9NUQ7 469 aa15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 RBFOX1Q9NWB1 397 aaKnown RBP15.51■□□□□ 0.07
TSPAN3-201ENST00000267970 HSF5Q4G112 596 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms