RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Hrh3P58406 445 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 DtymkP97930 212 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Itgb8Q0VBD0 767 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 LsampQ8BLK3 341 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Cox10Q8CFY5 443 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gfm1Q8K0D5 751 aaKnown RBP13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 BmfQ91ZE9 185 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Spaca7Q9D2S4 182 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Cpn2Q9DBB9 547 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Wwtr1Q9EPK5 395 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Isg20Q9JL16 300 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Htra1Q9R118 480 aa13.44□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gm11361A0A1Y7VKY1 152 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Fnd3c2A2AP83 941 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gm17555F6U8B9 371 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gm5724L7N264 670 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Pip5k1cO70161 661 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gpld1O70362 837 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Rps18P62270 152 aaKnown RBP13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 CpeQ00493 476 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gm45902Q3UDN3 361 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Fzd8Q61091 685 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Sqstm1Q64337 442 aaKnown RBP13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Rcor3Q6PGA0 451 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gpr107Q8BUV8 551 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tmem200aQ8C817 491 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr1233Q8VGN0 305 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Kiaa2013Q91X21 634 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Lrch4Q921G6 680 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tmed9Q99KF1 235 aaKnown RBP13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Steap1Q9CWR7 339 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Yif1bQ9CX30 311 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Rps19Q9CZX8 145 aaKnown RBP13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Mrps34Q9JIK9 218 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Cpn1Q9JJN5 457 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Dgat1Q9Z2A7 498 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Nup214Q80U93 2085 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Prss56F2YMG0 604 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Vmn2r51L7N215 852 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gna13P27601 377 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Rps4xP62702 263 aaKnown RBP13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tmem247Q497K7 211 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Clcn4Q61418 747 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 BpiQ67E05 483 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Zfp954Q7TNU5 416 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Slc15a3Q8BPX9 578 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Emc1Q8C7X2 997 aaKnown RBP13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr1387Q8VFA9 311 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr862Q8VFJ1 306 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Ubqln4Q99NB8 596 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tspan31Q9CQ88 210 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Wdsub1Q9D0I6 474 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 SrfQ9JM73 504 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Fbxl6Q9QXW0 535 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Bloc1s6Q9R0C0 172 aa13.43□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gm8973D3YX71 104 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gm42957D6RFQ2 366 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Ces2gE9PV38 560 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr608E9Q564 316 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gm21897J3KMP5 500 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gm21750L7N228 499 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 OtpO09113 325 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Adrb2P18762 418 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Sox18P43680 377 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 HbegfQ06186 208 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Slc6a15Q8BG16 729 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Rgp1Q8BHT7 391 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Coro2aQ8C0P5 524 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Paip1Q8VE62 400 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr1008Q8VGC7 313 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Fmo4Q8VHG0 560 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Ces2cQ91WG0 561 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Klf7Q99JB0 301 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 NwcQ9CQI4 244 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Pfn4Q9D6I3 129 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tmem43Q9DBS1 400 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Slc39a1Q9QZ03 324 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 ClcnkaQ9WUB7 687 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 NcdnQ9Z0E0 729 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Dctn3Q9Z0Y1 186 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Skp2Q9Z0Z3 424 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Pramef25A2ASI9 494 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gm4177D3YTX5 305 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Mettl7a3G3X9G9 244 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Vmn1r127K7N6J5 305 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Vmn1r142K7N6U0 305 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Vmn1r94K7N6X3 305 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Vmn1r115K7N6Y3 295 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Vmn1r159K7N701 305 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Anxa2P07356 339 aaKnown RBP13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Cd40P27512 289 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Barhl1P63157 327 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tnfrsf26P83626 204 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Fam187bQ0VAY3 358 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 CalcrQ60755 533 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr151Q60893 309 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Npepl1Q6NSR8 524 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 SprnQ8BWU1 147 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Scmh1Q8K214 706 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 H2afjQ8R1M2 129 aa13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms