RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ADAM18Q9Y3Q7 739 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 NCOA6Q14686 2063 aaPredicted RBP17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 IMPA2O14732 288 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 IDH3BO43837 385 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 PPP1R3DO95685 299 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 SNAP29O95721 258 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 TXNDC12O95881 172 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 BCL10O95999 233 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 EPHA2P29317 976 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 AGTR1P30556 359 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 POLR2IP36954 125 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 RPS6KA3P51812 740 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 RPL27P61353 136 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 CDK5Q00535 292 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 PTGES3Q15185 160 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 TMEM201Q5SNT2 666 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 ARMC4Q5T2S8 1044 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 FAM214BQ7L5A3 538 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 GCNT2Q8N0V5 402 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 OR4Q3Q8NH05 313 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 RND1Q92730 232 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 INTS12Q96CB8 462 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 TXNDC15Q96J42 360 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 PSMG3-AS1Q96PY0 264 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 TSPAN32Q96QS1 320 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 MBOAT4Q96T53 435 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 TOR3AQ9H497 397 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 RIBC2Q9H4K1 309 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 MED29Q9NX70 200 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 ZNF346Q9UL40 294 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 IER3IP1Q9Y5U9 82 aa17.6■□□□□ 0.41
PDLIM2-221ENST00000622702 SPTAN1Q13813 2472 aaKnown RBP17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 A1L4Q6 167 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 ZAR1LA6NP61 321 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 E9PQ18 207 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 AKAP8O43823 692 aaKnown RBP17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 TMIGD3P0DMS9 266 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 SDHAP31040 664 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 NTF4P34130 210 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 VHLP40337 213 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 CLDN17P56750 224 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 GINS1Q14691 196 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 PGGHGQ32M88 737 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 ZIK1Q3SY52 487 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 FAM205BPQ63HN1 556 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 HDDC2Q7Z4H3 204 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 ZNF808Q8N4W9 903 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 ARIH2OSQ8N7S6 290 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 OR6X1Q8NH79 312 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 ZNF519Q8TB69 540 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 ASB10Q8WXI3 467 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 ZNF775Q96BV0 537 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 Q96M85 177 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 ADAD1Q96M93 576 aaKnown RBP17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 ZNF570Q96NI8 536 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 ERMAPQ96PL5 475 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 GRIP2Q9C0E4 1043 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 COQ3Q9NZJ6 369 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 GRHPRQ9UBQ7 328 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 NOSIPQ9Y314 301 aaKnown RBP17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 EMC9Q9Y3B6 208 aa17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 INTS1Q8N201 2190 aaKnown RBP17.59■□□□□ 0.41
PDLIM2-221ENST00000622702 ZNF432O94892 652 aa17.58■□□□□ 0.41
PDLIM2-221ENST00000622702 KIR2DL2P43627 348 aaPredicted RBP17.58■□□□□ 0.41
PDLIM2-221ENST00000622702 FOXF2Q12947 444 aa17.58■□□□□ 0.41
PDLIM2-221ENST00000622702 TOP3AQ13472 1001 aaPredicted RBP17.58■□□□□ 0.41
PDLIM2-221ENST00000622702 XKRXQ6PP77 449 aa17.58■□□□□ 0.41
PDLIM2-221ENST00000622702 IQCF1Q8N6M8 205 aa17.58■□□□□ 0.41
PDLIM2-221ENST00000622702 NAXEQ8NCW5 288 aa17.58■□□□□ 0.41
PDLIM2-221ENST00000622702 PARPBPQ9NWS1 579 aa17.58■□□□□ 0.41
PDLIM2-221ENST00000622702 PTPN13Q12923 2485 aa17.58■□□□□ 0.4
PDLIM2-221ENST00000622702 SLC35F4A4IF30 521 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 A6NIZ1 184 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 HSPB2A8KAH6 182 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 TNFSF13O75888 250 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 GRK5P34947 590 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 BIDP55957 195 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 RAP1BP61224 184 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 RAP1AP62834 184 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 MELKQ14680 651 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 HSPB2Q16082 182 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 SLX4IPQ5VYV7 408 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 TMEM236Q5W0B7 351 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 ACSM5Q6NUN0 579 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 AAED1Q7RTV5 226 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 CCDC71Q8IV32 467 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 OR6K3Q8NGY3 331 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 OR2M2Q96R28 347 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 EMC6Q9BV81 110 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 SFXN3Q9BWM7 321 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 RNF6Q9Y252 685 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 ASH1LQ9NR48 2969 aaKnown RBP17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 HECTD1Q9ULT8 2610 aa17.57■□□□□ 0.4
PDLIM2-221ENST00000622702 A0A0G2JNJ9 132 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 TEX13CA0A0J9YWL9 993 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 ZNF726A6NNF4 738 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 CENPBD1B2RD01 187 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 SLC16A6O15403 523 aa17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 MRPL33O75394 65 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-221ENST00000622702 IL18BPO95998 194 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms