RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 ARPC3O15145 178 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 SEC14L5O43304 696 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 PFDN1O60925 122 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 TRIM3O75382 744 aaPredicted RBP3.09□□□□□ -1.91
LIG4-205ENST00000614526 PAHP00439 452 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 RENP00797 406 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 FBXO45P0C2W1 286 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 ZNF806P0C7X5 589 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 PRKAR1AP10644 381 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 CTLA4P16410 223 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 DPP4P27487 766 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 GABRA5P31644 462 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 UGT2B10P36537 528 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 STARP49675 285 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 SSR4P51571 173 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 TAB1Q15750 504 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 TMEM44Q2T9K0 475 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 IDNKQ5T6J7 187 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 LINC01590Q5TEZ4 76 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 TMEM164Q5U3C3 297 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 SLC22A10Q63ZE4 541 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 TMEM225Q6GV28 225 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 LRRN1Q6UXK5 716 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 UTS2BQ765I0 119 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 NDUFAF7Q7L592 441 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.09□□□□□ -1.91
LIG4-205ENST00000614526 BPHLQ86WA6 291 aaPredicted RBP3.09□□□□□ -1.91
LIG4-205ENST00000614526 PARP16Q8N5Y8 322 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 ARIH2OSQ8N7S6 290 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 YIPF7Q8N8F6 280 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 ZNF248Q8NDW4 579 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 THOC3Q96J01 351 aaKnown RBP3.09□□□□□ -1.91
LIG4-205ENST00000614526 OR14A2Q96R54 314 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 DDOQ99489 341 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 HES7Q9BYE0 225 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 MMP27Q9H306 513 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 WDR54Q9H977 334 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 FKRPQ9H9S5 495 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 TRIM36Q9NQ86 728 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 STMN3Q9NZ72 180 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 KLHL21Q9UJP4 597 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 ZNF229Q9UJW7 825 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 NXT1Q9UKK6 140 aaKnown RBP3.09□□□□□ -1.91
LIG4-205ENST00000614526 COA3Q9Y2R0 106 aaPredicted RBP3.09□□□□□ -1.91
LIG4-205ENST00000614526 PCDHGA5Q9Y5G8 931 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 DCHS1Q96JQ0 3298 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 DNAJC13O75165 2243 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 RP1L1Q8IWN7 2480 aaPredicted RBP3.09□□□□□ -1.91
LIG4-205ENST00000614526 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 B4E171 279 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 NPIPA5E9PKD4 350 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 LOC110117498-PIK3R3F6TDL0 507 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 MS4A18H0YCH9 400 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 ZNF593O00488 134 aaPredicted RBP3.09□□□□□ -1.91
LIG4-205ENST00000614526 TP53I11O14683 189 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 GALR2O43603 387 aaPredicted RBP3.09□□□□□ -1.91
LIG4-205ENST00000614526 GLCEO94923 617 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 WNT11O96014 354 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 HLA-DPB1P04440 258 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 RFPL3SP0C7P2 107 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 ITGA3P26006 1051 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 TSPAN7P41732 249 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 GDI2P50395 445 aaKnown RBP3.09□□□□□ -1.91
LIG4-205ENST00000614526 LIMK1P53667 647 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 BIDP55957 195 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 NANOS3P60323 173 aaKnown RBP3.09□□□□□ -1.91
LIG4-205ENST00000614526 RPL27P61353 136 aaKnown RBP3.09□□□□□ -1.91
LIG4-205ENST00000614526 PUDPQ08623 228 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 SGCBQ16585 318 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 NTRK2Q16620 822 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 PLPPR5Q32ZL2 321 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 MS4A18Q3C1V0 323 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 ACSM3Q53FZ2 586 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 RNASE12Q5GAN4 147 aaKnown RBP3.09□□□□□ -1.91
LIG4-205ENST00000614526 SPANXN2Q5MJ10 180 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 ZNF517Q6ZMY9 492 aaPredicted RBP3.09□□□□□ -1.91
LIG4-205ENST00000614526 VASH2Q86V25 355 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 NR2C2APQ86WQ0 139 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 CENPSQ8N2Z9 138 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 ZNF433Q8N7K0 673 aaPredicted RBP3.09□□□□□ -1.91
LIG4-205ENST00000614526 SUMF1Q8NBK3 374 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 OR2M3Q8NG83 312 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 OR52N1Q8NH53 320 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 ABHD4Q8TB40 342 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 TTC9Q92623 222 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 DIRAS2Q96HU8 199 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 SLC25A18Q9H1K4 315 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 EVA1AQ9H8M9 152 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 SEC61A2Q9H9S3 476 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 SMURF1Q9HCE7 757 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 B3GAT2Q9NPZ5 323 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 SDHAF3Q9NRP4 125 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 LAMP5Q9UJQ1 280 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 NPIPA1Q9UND3 350 aa3.09□□□□□ -1.91
LIG4-205ENST00000614526 AK6Q9Y3D8 172 aaKnown RBP3.09□□□□□ -1.91
LIG4-205ENST00000614526 ZNF292O60281 2723 aa3.09□□□□□ -1.92
LIG4-205ENST00000614526 ZNF407Q9C0G0 2248 aa3.09□□□□□ -1.92
LIG4-205ENST00000614526 LOC102723996A0A087X1L8 192 aa3.09□□□□□ -1.92
LIG4-205ENST00000614526 PRSS37A4D1T9 235 aa3.09□□□□□ -1.92
LIG4-205ENST00000614526 SULT2B1O00204 365 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms